RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W TRZ1P36159 838 aaPredicted RBP6.16□□□□□ -1.42
SUB2YDL084W ATP3P38077 311 aaKnown RBP6.16□□□□□ -1.42
SUB2YDL084W PCS60P38137 543 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SUB2YDL084W SAK1P38990 1142 aa6.16□□□□□ -1.42
SUB2YDL084W INA22P40576 216 aa6.16□□□□□ -1.42
SUB2YDL084W GPD2P41911 440 aaKnown RBP6.16□□□□□ -1.42
SUB2YDL084W GCN20P43535 752 aaKnown RBP6.16□□□□□ -1.42
SUB2YDL084W EMP47P43555 445 aa6.16□□□□□ -1.42
SUB2YDL084W SGM1P47166 707 aa6.16□□□□□ -1.42
SUB2YDL084W ECL1P48235 211 aa6.16□□□□□ -1.42
SUB2YDL084W CGR1P53188 120 aa6.16□□□□□ -1.42
SUB2YDL084W ATF2P53296 535 aa6.16□□□□□ -1.42
SUB2YDL084W FYV6P53913 173 aa6.16□□□□□ -1.42
SUB2YDL084W ASI1P54074 624 aa6.16□□□□□ -1.42
SUB2YDL084W MRS2Q01926 470 aa6.16□□□□□ -1.42
SUB2YDL084W RPM2Q02773 1202 aa6.16□□□□□ -1.42
SUB2YDL084W MUB1Q03162 620 aa6.16□□□□□ -1.42
SUB2YDL084W YKU80Q04437 629 aa6.16□□□□□ -1.42
SUB2YDL084W SPC2Q04969 178 aa6.16□□□□□ -1.42
SUB2YDL084W ARP9Q05123 467 aa6.16□□□□□ -1.42
SUB2YDL084W RSC58Q07979 502 aa6.16□□□□□ -1.42
SUB2YDL084W ICL2Q12031 575 aa6.16□□□□□ -1.42
SUB2YDL084W IDI1P15496 288 aa6.15□□□□□ -1.43
SUB2YDL084W OM45P16547 393 aa6.15□□□□□ -1.43
SUB2YDL084W RAD53P22216 821 aa6.15□□□□□ -1.43
SUB2YDL084W MCM2P29469 868 aa6.15□□□□□ -1.43
SUB2YDL084W LYP1P32487 611 aa6.15□□□□□ -1.43
SUB2YDL084W MEI5P32489 222 aa6.15□□□□□ -1.43
SUB2YDL084W KAR9P32526 644 aa6.15□□□□□ -1.43
SUB2YDL084W WHI3P34761 661 aaKnown RBP6.15□□□□□ -1.43
SUB2YDL084W YPT52P36018 234 aaKnown RBP6.15□□□□□ -1.43
SUB2YDL084W VPS51P36116 164 aa6.15□□□□□ -1.43
SUB2YDL084W PBY1P38254 753 aa6.15□□□□□ -1.43
SUB2YDL084W IFA38P38286 347 aa6.15□□□□□ -1.43
SUB2YDL084W PEX32P38292 413 aa6.15□□□□□ -1.43
SUB2YDL084W KEL1P38853 1164 aaKnown RBP6.15□□□□□ -1.43
SUB2YDL084W VPS45P38932 577 aa6.15□□□□□ -1.43
SUB2YDL084W ATG3P40344 310 aa6.15□□□□□ -1.43
SUB2YDL084W PKP1P40530 394 aa6.15□□□□□ -1.43
SUB2YDL084W ABM1P47146 123 aa6.15□□□□□ -1.43
SUB2YDL084W TOM22P49334 152 aa6.15□□□□□ -1.43
SUB2YDL084W YML6P51998 286 aa6.15□□□□□ -1.43
SUB2YDL084W UBA2P52488 636 aa6.15□□□□□ -1.43
SUB2YDL084W NIS1P53939 407 aa6.15□□□□□ -1.43
SUB2YDL084W ALD6P54115 500 aaKnown RBP6.15□□□□□ -1.43
SUB2YDL084W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
SUB2YDL084W YDR131CQ03899 556 aa6.15□□□□□ -1.43
SUB2YDL084W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
SUB2YDL084W YOR289WQ12012 251 aaPredicted RBP6.15□□□□□ -1.43
SUB2YDL084W APL4Q12028 832 aa6.15□□□□□ -1.43
SUB2YDL084W SMF3Q12078 473 aaPredicted RBP6.15□□□□□ -1.43
SUB2YDL084W REX3Q12090 404 aa6.15□□□□□ -1.43
SUB2YDL084W AHC1Q12433 566 aa6.15□□□□□ -1.43
SUB2YDL084W YBL113CQ7M4S9 792 aa6.15□□□□□ -1.43
SUB2YDL084W TUS1Q06412 1307 aa6.15□□□□□ -1.43
SUB2YDL084W SSN2P38931 1420 aa6.15□□□□□ -1.43
SUB2YDL084W MYO4P32492 1471 aa6.15□□□□□ -1.43
SUB2YDL084W CDC16P09798 840 aa6.14□□□□□ -1.43
SUB2YDL084W PRP6P19735 899 aaPredicted RBP6.14□□□□□ -1.43
SUB2YDL084W HSP60P19882 572 aaKnown RBP6.14□□□□□ -1.43
SUB2YDL084W DAL1P32375 460 aa6.14□□□□□ -1.43
SUB2YDL084W PPQ1P32945 549 aa6.14□□□□□ -1.43
SUB2YDL084W DOM34P33309 386 aa6.14□□□□□ -1.43
SUB2YDL084W YBR242WP38331 238 aa6.14□□□□□ -1.43
SUB2YDL084W LRP1P38801 184 aaKnown RBP6.14□□□□□ -1.43
SUB2YDL084W DSS1P39112 969 aa6.14□□□□□ -1.43
SUB2YDL084W ZRG8P40021 1076 aa6.14□□□□□ -1.43
SUB2YDL084W ALA1P40825 983 aaKnown RBP6.14□□□□□ -1.43
SUB2YDL084W STU2P46675 888 aa6.14□□□□□ -1.43
SUB2YDL084W BNA1P47096 177 aa6.14□□□□□ -1.43
SUB2YDL084W CAF130P53280 1122 aaPredicted RBP6.14□□□□□ -1.43
SUB2YDL084W TAF8Q03750 510 aa6.14□□□□□ -1.43
SUB2YDL084W PHO92Q06390 306 aa6.14□□□□□ -1.43
SUB2YDL084W REH1Q06709 432 aa6.14□□□□□ -1.43
SUB2YDL084W PSR2Q07949 397 aa6.14□□□□□ -1.43
SUB2YDL084W TIF1P10081 395 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W HCA4P20448 770 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W PRP5P21372 849 aaPredicted RBP6.13□□□□□ -1.43
SUB2YDL084W LCB1P25045 558 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W IMP2'P32351 346 aa6.13□□□□□ -1.43
SUB2YDL084W ALG14P38242 237 aa6.13□□□□□ -1.43
SUB2YDL084W YBR138CP38277 524 aa6.13□□□□□ -1.43
SUB2YDL084W SRP72P38688 640 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W YHL012WP38709 493 aa6.13□□□□□ -1.43
SUB2YDL084W RTT107P38850 1070 aa6.13□□□□□ -1.43
SUB2YDL084W AGE2P40529 298 aa6.13□□□□□ -1.43
SUB2YDL084W NCS6P53088 359 aa6.13□□□□□ -1.43
SUB2YDL084W YGL140CP53120 1219 aa6.13□□□□□ -1.43
SUB2YDL084W EGD1Q02642 157 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W INA17Q02888 182 aa6.13□□□□□ -1.43
SUB2YDL084W YMR102CQ03177 834 aa6.13□□□□□ -1.43
SUB2YDL084W RVB1Q03940 463 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W RBA50Q04418 439 aa6.13□□□□□ -1.43
SUB2YDL084W IVY1Q04934 453 aa6.13□□□□□ -1.43
SUB2YDL084W DYN3Q04949 312 aa6.13□□□□□ -1.43
SUB2YDL084W EIS1Q05050 843 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W EAF1Q06337 982 aa6.13□□□□□ -1.43
SUB2YDL084W SYO1Q07395 620 aa6.13□□□□□ -1.43
SUB2YDL084W NOP6Q07623 225 aaKnown RBP6.13□□□□□ -1.43
SUB2YDL084W ECM5Q03214 1411 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms