RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YGR016WP53209 190 aa2.16□□□□□ -2.06
USO1YDL058W MDR1P53258 950 aa2.16□□□□□ -2.06
USO1YDL058W VPS75P53853 264 aa2.16□□□□□ -2.06
USO1YDL058W YNL181WP53878 407 aa2.16□□□□□ -2.06
USO1YDL058W YNL058CP53947 316 aa2.16□□□□□ -2.06
USO1YDL058W YPL109CQ02981 657 aa2.16□□□□□ -2.06
USO1YDL058W RPN7Q06103 429 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W TYW1Q08960 810 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W NMD4Q12129 218 aa2.16□□□□□ -2.06
USO1YDL058W PSF3Q12146 194 aa2.16□□□□□ -2.06
USO1YDL058W SSF2Q12153 453 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W RAD6P06104 172 aa2.16□□□□□ -2.06
USO1YDL058W RAD53P22216 821 aa2.16□□□□□ -2.06
USO1YDL058W VPS34P22543 875 aa2.16□□□□□ -2.06
USO1YDL058W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
USO1YDL058W CLB4P24871 460 aa2.16□□□□□ -2.06
USO1YDL058W COQ8P27697 501 aa2.16□□□□□ -2.06
USO1YDL058W DBF4P32325 704 aa2.16□□□□□ -2.06
USO1YDL058W GCD11P32481 527 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W KAP122P32767 1081 aa2.16□□□□□ -2.06
USO1YDL058W EMC3P36039 253 aa2.16□□□□□ -2.06
USO1YDL058W TFA2P36145 328 aa2.16□□□□□ -2.06
USO1YDL058W MET1P36150 593 aa2.16□□□□□ -2.06
USO1YDL058W PSY4P38193 441 aa2.16□□□□□ -2.06
USO1YDL058W YBR071WP38243 211 aa2.16□□□□□ -2.06
USO1YDL058W SLX1P38324 304 aa2.16□□□□□ -2.06
USO1YDL058W YHR078WP38799 552 aa2.16□□□□□ -2.06
USO1YDL058W FET3P38993 636 aa2.16□□□□□ -2.06
USO1YDL058W FHL1P39521 936 aa2.16□□□□□ -2.06
USO1YDL058W YAR028WP39548 234 aa2.16□□□□□ -2.06
USO1YDL058W RLP7P40693 322 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W CDC40P40968 455 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W LSM1P47017 172 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W TAF4P50105 388 aa2.16□□□□□ -2.06
USO1YDL058W CAF130P53280 1122 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W BRE5P53741 515 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W SRP1Q02821 542 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W KAP120Q02932 1032 aa2.16□□□□□ -2.06
USO1YDL058W SPO19Q03029 223 aa2.16□□□□□ -2.06
USO1YDL058W YML119WQ03208 357 aa2.16□□□□□ -2.06
USO1YDL058W IVY1Q04934 453 aa2.16□□□□□ -2.06
USO1YDL058W RQC1Q05468 723 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W SPO77Q06134 477 aa2.16□□□□□ -2.06
USO1YDL058W LOT6Q07923 191 aa2.16□□□□□ -2.06
USO1YDL058W FCF2Q12035 217 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W ARP7Q12406 477 aa2.16□□□□□ -2.06
USO1YDL058W TSC13Q99190 310 aa2.16□□□□□ -2.06
USO1YDL058W IRC20Q06554 1556 aa2.16□□□□□ -2.06
USO1YDL058W SSM4P40318 1319 aa2.16□□□□□ -2.06
USO1YDL058W QCR7P00128 127 aa2.16□□□□□ -2.06
USO1YDL058W ARG4P04076 463 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W FUR4P05316 633 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
USO1YDL058W TUB3P09734 445 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W TRL1P09880 827 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W LAT1P12695 482 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W HOP1P20050 605 aa2.16□□□□□ -2.06
USO1YDL058W LYP1P32487 611 aa2.16□□□□□ -2.06
USO1YDL058W OAF3P36023 863 aa2.16□□□□□ -2.06
USO1YDL058W AIM29P36154 155 aa2.16□□□□□ -2.06
USO1YDL058W CST26P38226 397 aa2.16□□□□□ -2.06
USO1YDL058W ORC6P38826 435 aa2.16□□□□□ -2.06
USO1YDL058W MGS1P40151 587 aa2.16□□□□□ -2.06
USO1YDL058W NUP82P40368 713 aa2.16□□□□□ -2.06
USO1YDL058W YMR1P47147 688 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
USO1YDL058W ELA1P53861 379 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W GTR1Q00582 310 aa2.16□□□□□ -2.06
USO1YDL058W UBX2Q04228 584 aa2.16□□□□□ -2.06
USO1YDL058W YKU80Q04437 629 aa2.16□□□□□ -2.06
USO1YDL058W YCS4Q06156 1176 aa2.16□□□□□ -2.06
USO1YDL058W FMP25Q08023 583 aa2.16□□□□□ -2.06
USO1YDL058W NSL1Q12143 216 aa2.16□□□□□ -2.06
USO1YDL058W YBL113CQ7M4S9 792 aa2.16□□□□□ -2.06
USO1YDL058W SST2P11972 698 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W RGR1P19263 1082 aa2.15□□□□□ -2.06
USO1YDL058W MRPL32P25348 183 aa2.15□□□□□ -2.06
USO1YDL058W URA1P28272 314 aaPredicted RBP2.15□□□□□ -2.06
USO1YDL058W VPH2P32341 215 aa2.15□□□□□ -2.06
USO1YDL058W BCH2P36122 765 aa2.15□□□□□ -2.06
USO1YDL058W UBP14P38237 781 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W TDP1P38319 544 aa2.15□□□□□ -2.06
USO1YDL058W PPE1P38796 400 aa2.15□□□□□ -2.06
USO1YDL058W MND2P40577 368 aa2.15□□□□□ -2.06
USO1YDL058W SCD6P45978 349 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06 RIP-Chip
USO1YDL058W GYP7P48365 746 aa2.15□□□□□ -2.06
USO1YDL058W RNR4P49723 345 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W PIP2P52960 996 aa2.15□□□□□ -2.06
USO1YDL058W MCM6P53091 1017 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W APM1Q00776 475 aaPredicted RBP2.15□□□□□ -2.06
USO1YDL058W IRC4Q03036 179 aa2.15□□□□□ -2.06
USO1YDL058W YMR209CQ03648 457 aa2.15□□□□□ -2.06
USO1YDL058W YLR225CQ05948 407 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W ARR1Q06596 294 aa2.15□□□□□ -2.06
USO1YDL058W SMC5Q08204 1093 aa2.15□□□□□ -2.06
USO1YDL058W CUE5Q08412 411 aaKnown RBP2.15□□□□□ -2.06
USO1YDL058W SLP1Q12232 587 aa2.15□□□□□ -2.06
USO1YDL058W RNR2P09938 399 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W KGD2P19262 463 aaPredicted RBP2.15□□□□□ -2.07
USO1YDL058W PRP6P19735 899 aaPredicted RBP2.15□□□□□ -2.07
USO1YDL058W PRP22P24384 1145 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms