RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C CEP3P40969 608 aa5.16□□□□□ -1.58
RPN4YDL020C CAF16P43569 289 aa5.16□□□□□ -1.58
RPN4YDL020C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
RPN4YDL020C VPS30Q02948 557 aa5.16□□□□□ -1.58
RPN4YDL020C CDA1Q06702 301 aa5.16□□□□□ -1.58
RPN4YDL020C GAL10P04397 699 aa5.16□□□□□ -1.58
RPN4YDL020C MCD4P36051 919 aa5.16□□□□□ -1.58
RPN4YDL020C YEN1P40028 759 aa5.16□□□□□ -1.58
RPN4YDL020C SDA1P53313 767 aaKnown RBP5.16□□□□□ -1.58
RPN4YDL020C HDA1P53973 706 aa5.16□□□□□ -1.58
RPN4YDL020C RPS9AO13516 197 aaKnown RBP5.15□□□□□ -1.59
RPN4YDL020C YCL002CP25565 263 aa5.15□□□□□ -1.59
RPN4YDL020C PCL2P25693 308 aa5.15□□□□□ -1.59
RPN4YDL020C YEL1P34225 687 aa5.15□□□□□ -1.59
RPN4YDL020C OMA1P36163 345 aa5.15□□□□□ -1.59
RPN4YDL020C YKR011CQ02209 353 aa5.15□□□□□ -1.59
RPN4YDL020C LRS4Q04087 347 aaKnown RBP5.15□□□□□ -1.59
RPN4YDL020C THI73Q07904 523 aa5.15□□□□□ -1.59
RPN4YDL020C YDL177CQ12257 170 aa5.15□□□□□ -1.59
RPN4YDL020C RPD3P32561 433 aa5.14□□□□□ -1.59
RPN4YDL020C TYE7P33122 291 aaPredicted RBP5.14□□□□□ -1.59
RPN4YDL020C MND2P40577 368 aa5.14□□□□□ -1.59
RPN4YDL020C PMT3P47190 753 aa5.14□□□□□ -1.59
RPN4YDL020C SNP1Q00916 300 aaPredicted RBP5.14□□□□□ -1.59
RPN4YDL020C SSB1P11484 613 aaKnown RBP5.13□□□□□ -1.59
RPN4YDL020C SFL1P20134 766 aa5.13□□□□□ -1.59
RPN4YDL020C CYS3P31373 394 aaKnown RBP5.13□□□□□ -1.59
RPN4YDL020C SSB2P40150 613 aaKnown RBP5.13□□□□□ -1.59
RPN4YDL020C MGS1P40151 587 aa5.13□□□□□ -1.59
RPN4YDL020C ALY2P47029 1046 aa5.13□□□□□ -1.59
RPN4YDL020C HXT16P47185 567 aa5.13□□□□□ -1.59
RPN4YDL020C PSP2P50109 593 aaKnown RBP5.13□□□□□ -1.59
RPN4YDL020C INP52P50942 1183 aa5.13□□□□□ -1.59
RPN4YDL020C NUP145P49687 1317 aa5.13□□□□□ -1.59
RPN4YDL020C HOG1P32485 435 aa5.12□□□□□ -1.59
RPN4YDL020C SAP190P36123 1033 aa5.12□□□□□ -1.59
RPN4YDL020C POL12P38121 705 aaPredicted RBP5.12□□□□□ -1.59
RPN4YDL020C RLP7P40693 322 aaKnown RBP5.12□□□□□ -1.59
RPN4YDL020C YGR237CP50089 785 aa5.12□□□□□ -1.59
RPN4YDL020C MET13P53128 600 aa5.12□□□□□ -1.59
RPN4YDL020C SNO2P53823 222 aa5.12□□□□□ -1.59
RPN4YDL020C ROT1Q03691 256 aa5.12□□□□□ -1.59
RPN4YDL020C SSL1Q04673 461 aaPredicted RBP5.12□□□□□ -1.59
RPN4YDL020C SGD1Q06132 899 aa5.12□□□□□ -1.59
RPN4YDL020C YOR352WQ08816 343 aa5.12□□□□□ -1.59
RPN4YDL020C SPE1P08432 466 aa5.12□□□□□ -1.59
RPN4YDL020C POA1P38218 177 aa5.12□□□□□ -1.59
RPN4YDL020C RPN10P38886 268 aaKnown RBP5.12□□□□□ -1.59
RPN4YDL020C YIL108WP40483 696 aaKnown RBP5.12□□□□□ -1.59
RPN4YDL020C PUS2P53167 370 aa5.12□□□□□ -1.59
RPN4YDL020C UME1Q03010 460 aa5.12□□□□□ -1.59
RPN4YDL020C PLB2Q03674 706 aa5.12□□□□□ -1.59
RPN4YDL020C COG8Q04632 607 aa5.12□□□□□ -1.59
RPN4YDL020C YBR182C-AQ8TGU6 64 aa5.12□□□□□ -1.59
RPN4YDL020C DFG16Q99234 619 aa5.12□□□□□ -1.59
RPN4YDL020C DIF1O13577 133 aa5.11□□□□□ -1.59
RPN4YDL020C PRC1P00729 532 aa5.11□□□□□ -1.59
RPN4YDL020C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
RPN4YDL020C PCM1P38628 557 aaKnown RBP5.11□□□□□ -1.59
RPN4YDL020C SET5P38890 526 aaKnown RBP5.11□□□□□ -1.59
RPN4YDL020C SHR5P41912 237 aa5.11□□□□□ -1.59
RPN4YDL020C GTF1P53260 183 aaPredicted RBP5.11□□□□□ -1.59
RPN4YDL020C TPO1Q07824 586 aa5.11□□□□□ -1.59
RPN4YDL020C YOR022CQ12204 715 aa5.11□□□□□ -1.59
RPN4YDL020C TYS1P36421 394 aaKnown RBP5.1□□□□□ -1.59
RPN4YDL020C LAM1P38851 1228 aa5.1□□□□□ -1.59
RPN4YDL020C AIM14P53109 570 aa5.1□□□□□ -1.59
RPN4YDL020C PBP1P53297 722 aaKnown RBP5.1□□□□□ -1.59
RPN4YDL020C MRPL22P53881 309 aa5.1□□□□□ -1.59
RPN4YDL020C NHX1Q04121 633 aa5.1□□□□□ -1.59
RPN4YDL020C ATG33Q06485 197 aa5.1□□□□□ -1.59
RPN4YDL020C HAL9Q12180 1030 aa5.1□□□□□ -1.59
RPN4YDL020C GLT1Q12680 2145 aaKnown RBP5.1□□□□□ -1.59
RPN4YDL020C ATG19P35193 415 aa5.09□□□□□ -1.59
RPN4YDL020C LRG1P35688 1017 aa5.09□□□□□ -1.59
RPN4YDL020C GCV2P49095 1034 aa5.09□□□□□ -1.59
RPN4YDL020C GPG1P53130 126 aa5.09□□□□□ -1.59
RPN4YDL020C ADY3Q07732 790 aa5.09□□□□□ -1.59
RPN4YDL020C GUP2Q08929 609 aa5.09□□□□□ -1.59
RPN4YDL020C GIN4Q12263 1142 aa5.09□□□□□ -1.59
RPN4YDL020C FBP1P09201 348 aa5.08□□□□□ -1.6
RPN4YDL020C TOM20P35180 183 aa5.08□□□□□ -1.6
RPN4YDL020C MAC1P35192 417 aa5.08□□□□□ -1.6
RPN4YDL020C MEF2P39677 819 aa5.08□□□□□ -1.6
RPN4YDL020C YDR338CQ05497 695 aa5.08□□□□□ -1.6
RPN4YDL020C CRR1Q05790 422 aa5.08□□□□□ -1.6
RPN4YDL020C WHI4Q07655 649 aaKnown RBP5.08□□□□□ -1.6
RPN4YDL020C GUD1Q07729 489 aa5.08□□□□□ -1.6
RPN4YDL020C THI21Q08975 551 aa5.08□□□□□ -1.6
RPN4YDL020C FAP7Q12055 197 aaPredicted RBP5.08□□□□□ -1.6
RPN4YDL020C HMG1P12683 1054 aa5.08□□□□□ -1.6
RPN4YDL020C MIH1P23748 554 aa5.08□□□□□ -1.6
RPN4YDL020C HSL7P38274 827 aa5.08□□□□□ -1.6
RPN4YDL020C DOT6P40059 670 aaKnown RBP5.08□□□□□ -1.6
RPN4YDL020C MET12P46151 657 aa5.08□□□□□ -1.6
RPN4YDL020C ECL1P48235 211 aa5.08□□□□□ -1.6
RPN4YDL020C DUS1P53759 423 aaKnown RBP5.08□□□□□ -1.6
RPN4YDL020C RPP2AP05319 106 aaKnown RBP5.07□□□□□ -1.6
RPN4YDL020C YJR096WP47137 282 aa5.07□□□□□ -1.6
RPN4YDL020C MTQ2Q03920 221 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms