RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	TMN2	Q04562	672 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	OMS1	Q06668	471 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	ALG7	P07286	448 aa		4.75	□□□□□ -1.65
YCR001W	YCR001W	SPF1	P39986	1215 aa	Known RBP	4.75	□□□□□ -1.65
YCR001W	YCR001W	CEP3	P40969	608 aa		4.75	□□□□□ -1.65
YCR001W	YCR001W	CCM1	P48237	864 aa	Predicted RBP	4.75	□□□□□ -1.65
YCR001W	YCR001W	TDA5	Q06417	326 aa	Known RBP	4.75	□□□□□ -1.65
YCR001W	YCR001W	ACF2	Q12168	779 aa		4.75	□□□□□ -1.65
YCR001W	YCR001W	PPR1	P07272	904 aa	Predicted RBP	4.74	□□□□□ -1.65
YCR001W	YCR001W	HBS1	P32769	611 aa	Known RBP	4.74	□□□□□ -1.65
YCR001W	YCR001W	TYE7	P33122	291 aa	Predicted RBP	4.74	□□□□□ -1.65
YCR001W	YCR001W	YBR184W	P38299	523 aa		4.74	□□□□□ -1.65
YCR001W	YCR001W	TOK1	P40310	691 aa		4.74	□□□□□ -1.65
YCR001W	YCR001W	LCD1	Q04377	747 aa		4.74	□□□□□ -1.65
YCR001W	YCR001W	PRP9	P19736	530 aa	Known RBP	4.73	□□□□□ -1.65
YCR001W	YCR001W	STU2	P46675	888 aa		4.73	□□□□□ -1.65
YCR001W	YCR001W	TIM44	Q01852	431 aa		4.73	□□□□□ -1.65
YCR001W	YCR001W	YKR011C	Q02209	353 aa		4.73	□□□□□ -1.65
YCR001W	YCR001W	MUK1	Q02866	612 aa		4.73	□□□□□ -1.65
YCR001W	YCR001W	BUL2	Q03758	920 aa	Known RBP	4.73	□□□□□ -1.65
YCR001W	YCR001W	SWM1	Q12379	170 aa		4.73	□□□□□ -1.65
YCR001W	YCR001W	REC104	P33323	182 aa		4.72	□□□□□ -1.65
YCR001W	YCR001W	CTF13	P35203	478 aa		4.72	□□□□□ -1.65
YCR001W	YCR001W	CTF8	P38877	133 aa		4.72	□□□□□ -1.65
YCR001W	YCR001W	HDA1	P53973	706 aa		4.72	□□□□□ -1.65
YCR001W	YCR001W	YPR071W	Q12346	211 aa		4.72	□□□□□ -1.65
YCR001W	YCR001W	TUB3	P09734	445 aa	Known RBP	4.71	□□□□□ -1.66
YCR001W	YCR001W	YBR284W	P38150	797 aa		4.71	□□□□□ -1.66
YCR001W	YCR001W	QRI1	P43123	477 aa	Known RBP	4.71	□□□□□ -1.66
YCR001W	YCR001W	ALR2	P43553	858 aa		4.71	□□□□□ -1.66
YCR001W	YCR001W	PFD1	P46988	109 aa		4.71	□□□□□ -1.66
YCR001W	YCR001W	TRM11	Q12463	433 aa		4.71	□□□□□ -1.66
YCR001W	YCR001W	RPS9A	O13516	197 aa	Known RBP	4.7	□□□□□ -1.66
YCR001W	YCR001W	MET3	P08536	511 aa		4.7	□□□□□ -1.66
YCR001W	YCR001W	URA1	P28272	314 aa	Predicted RBP	4.7	□□□□□ -1.66
YCR001W	YCR001W	CDC11	P32458	415 aa		4.7	□□□□□ -1.66
YCR001W	YCR001W	DLT1	Q04216	342 aa		4.7	□□□□□ -1.66
YCR001W	YCR001W	IRC10	Q08118	586 aa		4.7	□□□□□ -1.66
YCR001W	YCR001W	FRE5	Q08908	694 aa		4.7	□□□□□ -1.66
YCR001W	YCR001W	SNU71	P53207	620 aa	Known RBP	4.69	□□□□□ -1.66
YCR001W	YCR001W	GND2	P53319	492 aa		4.69	□□□□□ -1.66
YCR001W	YCR001W	FMP25	Q08023	583 aa		4.69	□□□□□ -1.66
YCR001W	YCR001W	MTH1	P35198	433 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	PPS1	P38148	807 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	RPP1	P38786	293 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	YHR078W	P38799	552 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	ELO3	P40319	345 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	PUS2	P53167	370 aa		4.68	□□□□□ -1.66
YCR001W	YCR001W	GRX1	P25373	110 aa	Known RBP	4.67	□□□□□ -1.66
YCR001W	YCR001W	SPC42	P36094	363 aa		4.67	□□□□□ -1.66
YCR001W	YCR001W	FKH2	P41813	862 aa		4.67	□□□□□ -1.66
YCR001W	YCR001W	UTP8	P53276	713 aa	Known RBP	4.67	□□□□□ -1.66
YCR001W	YCR001W	UBX5	Q06682	500 aa		4.67	□□□□□ -1.66
YCR001W	YCR001W	HBT1	Q07653	1046 aa	Known RBP	4.67	□□□□□ -1.66
YCR001W	YCR001W	MPH2	P0CD99	609 aa		4.66	□□□□□ -1.66
YCR001W	YCR001W	CAF20	P12962	161 aa	Known RBP	4.66	□□□□□ -1.66
YCR001W	YCR001W	PRP4	P20053	465 aa	Known RBP	4.66	□□□□□ -1.66
YCR001W	YCR001W	SCT1	P32784	759 aa		4.66	□□□□□ -1.66
YCR001W	YCR001W	VHR1	P40522	640 aa		4.66	□□□□□ -1.66
YCR001W	YCR001W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
YCR001W	YCR001W	MRPS35	P53292	345 aa		4.66	□□□□□ -1.66
YCR001W	YCR001W	EAF1	Q06337	982 aa		4.66	□□□□□ -1.66
YCR001W	YCR001W	WRS1	Q12109	432 aa	Known RBP	4.66	□□□□□ -1.66
YCR001W	YCR001W	MSD1	P15179	658 aa	Known RBP	4.65	□□□□□ -1.67
YCR001W	YCR001W	CYS3	P31373	394 aa	Known RBP	4.65	□□□□□ -1.67
YCR001W	YCR001W	PET10	P36139	283 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	MUP1	P50276	574 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	ADY4	Q05955	493 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	SPO75	Q07798	868 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	ENV7	Q12003	364 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	HBN1	Q96VH4	193 aa		4.65	□□□□□ -1.67
YCR001W	YCR001W	RPL8B	P29453	256 aa	Known RBP	4.64	□□□□□ -1.67
YCR001W	YCR001W	YHL017W	P38745	532 aa		4.64	□□□□□ -1.67
YCR001W	YCR001W	ATF1	P40353	525 aa		4.64	□□□□□ -1.67
YCR001W	YCR001W	DAS1	P47005	663 aa		4.64	□□□□□ -1.67
YCR001W	YCR001W	ERP6	P53198	216 aa		4.64	□□□□□ -1.67
YCR001W	YCR001W	DUS1	P53759	423 aa	Known RBP	4.64	□□□□□ -1.67
YCR001W	YCR001W	HAL9	Q12180	1030 aa		4.64	□□□□□ -1.67
YCR001W	YCR001W	ARE1	P25628	610 aa		4.63	□□□□□ -1.67
YCR001W	YCR001W	SDS3	P40505	327 aa		4.63	□□□□□ -1.67
YCR001W	YCR001W	NOG2	P53742	486 aa	Known RBP	4.63	□□□□□ -1.67
YCR001W	YCR001W	ASI2	P53895	289 aa		4.63	□□□□□ -1.67
YCR001W	YCR001W	NAN1	Q02931	896 aa	Known RBP	4.63	□□□□□ -1.67
YCR001W	YCR001W	PKH1	Q03407	766 aa		4.63	□□□□□ -1.67
YCR001W	YCR001W	SSF2	Q12153	453 aa	Predicted RBP	4.63	□□□□□ -1.67
YCR001W	YCR001W	PZF1	P39933	429 aa		4.62	□□□□□ -1.67
YCR001W	YCR001W	NIT3	P49954	291 aa		4.62	□□□□□ -1.67
YCR001W	YCR001W	LGE1	Q02796	332 aa	Known RBP	4.62	□□□□□ -1.67
YCR001W	YCR001W	CRR1	Q05790	422 aa		4.62	□□□□□ -1.67
YCR001W	YCR001W	YOR022C	Q12204	715 aa		4.62	□□□□□ -1.67
YCR001W	YCR001W	TOP3	P13099	656 aa		4.61	□□□□□ -1.67
YCR001W	YCR001W	DAL7	P21826	554 aa		4.61	□□□□□ -1.67
YCR001W	YCR001W	SAK1	P38990	1142 aa		4.61	□□□□□ -1.67
YCR001W	YCR001W	MUS81	Q04149	632 aa	Predicted RBP	4.61	□□□□□ -1.67
YCR001W	YCR001W	MRH1	Q12117	320 aa	Predicted RBP	4.61	□□□□□ -1.67
YCR001W	YCR001W	OSH2	Q12451	1283 aa		4.61	□□□□□ -1.67
YCR001W	YCR001W	NGG1	P32494	702 aa		4.6	□□□□□ -1.67
YCR001W	YCR001W	CUE2	P36075	443 aa	Known RBP	4.6	□□□□□ -1.67
YCR001W	YCR001W	PAM1	P37304	830 aa	Known RBP	4.6	□□□□□ -1.67
YCR001W	YCR001W	YBR053C	P38235	358 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms