RNA–Protein interactions for RNA: YBL099W

ATP1, Transcript of Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, yeast

Gene ATP1, Length 1,638 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP1	YBL099W	RPC37	P36121	282 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	CST26	P38226	397 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	ECM2	P38241	364 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	TPS3	P38426	1054 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	TIF5	P38431	405 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	PAN5	P38787	379 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	SPC72	P39723	622 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	KAP123	P40069	1113 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	SMX2	P40204	77 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	ATG36	P46983	293 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	ILM1	P47155	203 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	YJR142W	P47173	342 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	YNL011C	P53980	444 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	UTP6	Q02354	440 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	YML119W	Q03208	357 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	OYE2	Q03558	400 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	YML082W	Q04533	649 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	RRG1	Q12167	365 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	HIF1	Q12373	385 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	SNF1	P06782	633 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	PCK1	P10963	549 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	NAM7	P30771	971 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	RAD5	P32849	1169 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	NMD5	P46970	1048 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	FMS1	P50264	508 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	RIM8	P53179	542 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	ESBP6	P53918	673 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	NCS2	P53923	493 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	YMR187C	Q03236	431 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	SPC24	Q04477	213 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	PNP1	Q05788	311 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	NOB1	Q08444	459 aa	Known RBP	6.1	□□□□□ -1.43
ATP1	YBL099W	NCA2	Q12374	616 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	TY4A-H	Q6Q5P6	413 aa		6.1	□□□□□ -1.43
ATP1	YBL099W	CHS2	P14180	963 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	SPO16	P17122	198 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	RAD51	P25454	400 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	PGM1	P33401	570 aa	Known RBP	6.09	□□□□□ -1.43
ATP1	YBL099W	BCH2	P36122	765 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	UBP13	P38187	747 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
ATP1	YBL099W	YBL028C	P38202	106 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	RRT2	P38332	387 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	HIS2	P38635	335 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	ULP2	P40537	1034 aa	Predicted RBP	6.09	□□□□□ -1.43
ATP1	YBL099W	FIG4	P42837	879 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	BRO1	P48582	844 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	GTR1	Q00582	310 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	SEN54	Q02825	467 aa	Predicted RBP	6.09	□□□□□ -1.43
ATP1	YBL099W	TDA9	Q04545	1251 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	LCB5	Q06147	687 aa	Known RBP	6.09	□□□□□ -1.43
ATP1	YBL099W	CMS1	Q07897	291 aa	Known RBP	6.09	□□□□□ -1.43
ATP1	YBL099W	LAP2	Q10740	671 aa		6.09	□□□□□ -1.43
ATP1	YBL099W	KIN1	P13185	1064 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	KRS1	P15180	591 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	SRV2	P17555	526 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	PRP4	P20053	465 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	PLC1	P32383	869 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	ZUO1	P32527	433 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	TFC4	P33339	1025 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	RPN3	P40016	523 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	TAN1	P53072	289 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	SNU71	P53207	620 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	ORC4	P54791	529 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
ATP1	YBL099W	MTG1	Q03151	367 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	TAF9	Q05027	157 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	FAR8	Q05040	523 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	RLP24	Q07915	199 aa	Known RBP	6.08	□□□□□ -1.44
ATP1	YBL099W	ARP6	Q12509	438 aa		6.08	□□□□□ -1.44
ATP1	YBL099W	SRD1	P09007	221 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	PHO8	P11491	566 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	SUP45	P12385	437 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	CLN3	P13365	580 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	BUD31	P25337	157 aa	Predicted RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	ADP1	P25371	1049 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	SEC21	P32074	935 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	EUG1	P32474	517 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	GCD6	P32501	712 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	YEL1	P34225	687 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	YBR062C	P38239	180 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	EXO5	P38289	585 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	NDT80	P38830	627 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	TDA10	P42938	290 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	DIP5	P53388	608 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	CNM67	P53865	581 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	SUB1	P54000	292 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	RPL22B	P56628	122 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	CDC33	P07260	213 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	KAR3	P17119	729 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	NIP1	P32497	812 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	RAD54	P32863	898 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	TRZ1	P36159	838 aa	Predicted RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
ATP1	YBL099W	MMS21	P38632	267 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	SEC26	P41810	973 aa	Known RBP	6.07	□□□□□ -1.44
ATP1	YBL099W	BRE2	P43132	505 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	TFB2	Q02939	513 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	VPS16	Q03308	798 aa		6.07	□□□□□ -1.44
ATP1	YBL099W	DPL1	Q05567	589 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms