RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	15.25	■□□□□ 0.03	not detected
SSA3	YBL075C	YMR114C	Q04471	368 aa	Known RBP	15.25	■□□□□ 0.03
SSA3	YBL075C	ENO1	P00924	437 aa	Known RBP	15.24	■□□□□ 0.03
SSA3	YBL075C	URA1	P28272	314 aa	Predicted RBP	15.24	■□□□□ 0.03
SSA3	YBL075C	MDL2	P33311	773 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	RTS1	P38903	757 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	VFA1	P40080	203 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	YAP5	P40574	245 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	JJJ2	P46997	583 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	NSG2	P53898	299 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	RSM24	Q03976	319 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	15.24	■□□□□ 0.03	not detected
SSA3	YBL075C	NOP12	Q08208	459 aa	Known RBP	15.24	■□□□□ 0.03
SSA3	YBL075C	GSC2	P40989	1895 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	IMP2'	P32351	346 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	FES1	P38260	290 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	TMA64	Q04600	565 aa	Known RBP	15.24	■□□□□ 0.03
SSA3	YBL075C	ATG26	Q06321	1198 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	NSE1	Q07913	336 aa		15.24	■□□□□ 0.03
SSA3	YBL075C	ADH4	P10127	382 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	GFA1	P14742	717 aa	Known RBP	15.23	■□□□□ 0.03
SSA3	YBL075C	UBC6	P33296	250 aa	Predicted RBP	15.23	■□□□□ 0.03
SSA3	YBL075C	LSG1	P53145	640 aa	Known RBP	15.23	■□□□□ 0.03
SSA3	YBL075C	TRM44	Q02648	567 aa	Known RBP	15.23	■□□□□ 0.03
SSA3	YBL075C	YML108W	Q03759	105 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	ATG17	Q06410	417 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	ATG20	Q07528	640 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	BUD7	Q08754	746 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	VIK1	Q12045	647 aa		15.23	■□□□□ 0.03
SSA3	YBL075C	SLA2	P33338	968 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	YFH7	P43591	353 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	EBS1	Q03466	884 aa	Known RBP	15.22	■□□□□ 0.03
SSA3	YBL075C	SPO71	Q03868	1245 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	GPR1	Q12361	961 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	YPR089W	O13585	888 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	ILV6	P25605	309 aa	Known RBP	15.22	■□□□□ 0.03
SSA3	YBL075C	PDC6	P26263	563 aa	Known RBP	15.22	■□□□□ 0.03
SSA3	YBL075C	HXT1	P32465	570 aa		15.22	■□□□□ 0.03
SSA3	YBL075C	IMD4	P50094	524 aa	Known RBP	15.22	■□□□□ 0.03
SSA3	YBL075C	PKH3	Q03306	898 aa	Predicted RBP	15.22	■□□□□ 0.03
SSA3	YBL075C	ARG82	P07250	355 aa		15.21	■□□□□ 0.03
SSA3	YBL075C	VMA4	P22203	233 aa	Known RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	KIP1	P28742	1111 aa		15.21	■□□□□ 0.03
SSA3	YBL075C	AIM21	P40563	679 aa		15.21	■□□□□ 0.03
SSA3	YBL075C	YNL320W	P42840	284 aa		15.21	■□□□□ 0.03
SSA3	YBL075C	SDA1	P53313	767 aa	Known RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	ESF2	P53743	316 aa	Known RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	RPT6	Q01939	405 aa	Known RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	PRP42	Q03776	544 aa	Known RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	RRG1	Q12167	365 aa	Predicted RBP	15.21	■□□□□ 0.03
SSA3	YBL075C	FLO1	P32768	1537 aa		15.2	■□□□□ 0.02
SSA3	YBL075C	HCA4	P20448	770 aa	Known RBP	15.2	■□□□□ 0.02
SSA3	YBL075C	OXP1	P28273	1286 aa		15.2	■□□□□ 0.02
SSA3	YBL075C	OPY2	Q06810	360 aa		15.2	■□□□□ 0.02
SSA3	YBL075C	WRS1	Q12109	432 aa	Known RBP	15.2	■□□□□ 0.02
SSA3	YBL075C	BOI1	P38041	980 aa	Known RBP	15.2	■□□□□ 0.02
SSA3	YBL075C	URB2	P47108	1174 aa		15.2	■□□□□ 0.02
SSA3	YBL075C	HOP2	P53187	214 aa		15.2	■□□□□ 0.02
SSA3	YBL075C	CFT2	Q12102	859 aa	Predicted RBP	15.2	■□□□□ 0.02
SSA3	YBL075C	LAM4	P38800	1345 aa		15.19	■□□□□ 0.02
SSA3	YBL075C	PPR1	P07272	904 aa	Predicted RBP	15.19	■□□□□ 0.02
SSA3	YBL075C	SIP5	P40210	489 aa	Known RBP	15.19	■□□□□ 0.02
SSA3	YBL075C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	15.19	■□□□□ 0.02	not detected
SSA3	YBL075C	THS1	P04801	734 aa	Known RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	CBP3	P21560	335 aa		15.18	■□□□□ 0.02
SSA3	YBL075C	DPB2	P24482	689 aa	Predicted RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	SEC20	P28791	383 aa		15.18	■□□□□ 0.02
SSA3	YBL075C	RRP9	Q06506	573 aa	Known RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	CLF1	Q12309	687 aa	Predicted RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	SRV2	P17555	526 aa	Known RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	PDS1	P40316	373 aa	Predicted RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	STB2	P46679	850 aa		15.18	■□□□□ 0.02
SSA3	YBL075C	COS6	P53344	381 aa		15.18	■□□□□ 0.02
SSA3	YBL075C	CIK1	Q01649	594 aa		15.18	■□□□□ 0.02
SSA3	YBL075C	RIO1	Q12196	484 aa	Known RBP	15.18	■□□□□ 0.02
SSA3	YBL075C	MSB1	P21339	1137 aa	Known RBP	15.17	■□□□□ 0.02
SSA3	YBL075C	BMH1	P29311	267 aa	Known RBP	15.17	■□□□□ 0.02
SSA3	YBL075C	ATG14	P38270	344 aa		15.17	■□□□□ 0.02
SSA3	YBL075C	SEN54	Q02825	467 aa	Predicted RBP	15.17	■□□□□ 0.02
SSA3	YBL075C	FAR1	P21268	830 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	SMX2	P40204	77 aa	Known RBP	15.16	■□□□□ 0.02
SSA3	YBL075C	IES1	P43579	692 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	LSC2	P53312	427 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	FAR11	P53917	953 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	CWC15	Q03772	175 aa	Known RBP	15.16	■□□□□ 0.02
SSA3	YBL075C	NAM7	P30771	971 aa	Known RBP	15.16	■□□□□ 0.02
SSA3	YBL075C	MRE11	P32829	692 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	HSP78	P33416	811 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	BCD1	P38772	366 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	FET4	P40988	552 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	SHE9	Q04172	456 aa		15.16	■□□□□ 0.02
SSA3	YBL075C	RPL24A	P04449	155 aa	Known RBP	15.15	■□□□□ 0.02
SSA3	YBL075C	SNF3	P10870	884 aa		15.15	■□□□□ 0.02
SSA3	YBL075C	VPS1	P21576	704 aa	Known RBP	15.15	■□□□□ 0.02
SSA3	YBL075C	BRL1	P38770	471 aa		15.15	■□□□□ 0.02
SSA3	YBL075C	YEL023C	P39992	682 aa		15.15	■□□□□ 0.02
SSA3	YBL075C	YNL040W	P53960	456 aa	Predicted RBP	15.15	■□□□□ 0.02
SSA3	YBL075C	GTB1	Q04924	702 aa		15.15	■□□□□ 0.02
SSA3	YBL075C	CHO2	P05374	869 aa	Known RBP	15.15	■□□□□ 0.02
SSA3	YBL075C	SPS22	P25380	463 aa		15.15	■□□□□ 0.02

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms