RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C PIN2Q12057 282 aa2.73□□□□□ -1.97
CLN3YAL040C SSF2Q12153 453 aaPredicted RBP2.73□□□□□ -1.97
CLN3YAL040C SPS1P08458 490 aa2.73□□□□□ -1.97
CLN3YAL040C YSC84P32793 468 aa2.73□□□□□ -1.97
CLN3YAL040C UGA4P32837 571 aa2.73□□□□□ -1.97
CLN3YAL040C YKL091CP33324 310 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C CCZ1P38273 704 aa2.73□□□□□ -1.97
CLN3YAL040C VAC8P39968 578 aa2.73□□□□□ -1.97
CLN3YAL040C TPM2P40414 161 aa2.73□□□□□ -1.97
CLN3YAL040C FYV10P40492 516 aa2.73□□□□□ -1.97
CLN3YAL040C YGL082WP53155 381 aa2.73□□□□□ -1.97
CLN3YAL040C RMT2Q03305 412 aa2.73□□□□□ -1.97
CLN3YAL040C VPS16Q03308 798 aa2.73□□□□□ -1.97
CLN3YAL040C RMD1Q03441 430 aa2.73□□□□□ -1.97
CLN3YAL040C GSF2Q04697 403 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C LPD1P09624 499 aaKnown RBP2.72□□□□□ -1.97
CLN3YAL040C STI1P15705 589 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
CLN3YAL040C RDH54P38086 958 aa2.72□□□□□ -1.97
CLN3YAL040C BUD6P41697 788 aa2.72□□□□□ -1.97
CLN3YAL040C YGL140CP53120 1219 aa2.72□□□□□ -1.97
CLN3YAL040C ALD6P54115 500 aaKnown RBP2.72□□□□□ -1.97
CLN3YAL040C YPL109CQ02981 657 aa2.72□□□□□ -1.97
CLN3YAL040C ADI1Q03677 179 aa2.72□□□□□ -1.97
CLN3YAL040C YLR358CO13565 187 aa2.71□□□□□ -1.98
CLN3YAL040C SEC23P15303 768 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C CLN2P20438 545 aa2.71□□□□□ -1.98
CLN3YAL040C LYS4P49367 693 aaPredicted RBP2.71□□□□□ -1.98
CLN3YAL040C TNA1P53322 534 aa2.71□□□□□ -1.98
CLN3YAL040C DNM1P54861 757 aa2.71□□□□□ -1.98
CLN3YAL040C CLU1Q03690 1277 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C NKP2Q06162 153 aa2.71□□□□□ -1.98
CLN3YAL040C EST2Q06163 884 aa2.71□□□□□ -1.98
CLN3YAL040C RSB1Q08417 382 aa2.71□□□□□ -1.98
CLN3YAL040C FAS2P19097 1887 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C TAF13P11747 167 aa2.71□□□□□ -1.98
CLN3YAL040C GCD7P32502 381 aaPredicted RBP2.71□□□□□ -1.98
CLN3YAL040C SER1P33330 395 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C KTR3P38130 404 aaPredicted RBP2.71□□□□□ -1.98
CLN3YAL040C OPY1P38271 328 aa2.71□□□□□ -1.98
CLN3YAL040C RFC1P38630 861 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C UBP12P39538 1254 aa2.71□□□□□ -1.98
CLN3YAL040C DAK2P43550 591 aa2.71□□□□□ -1.98
CLN3YAL040C HNT2P49775 206 aa2.71□□□□□ -1.98
CLN3YAL040C MDG1P53885 366 aa2.71□□□□□ -1.98
CLN3YAL040C PKH1Q03407 766 aa2.71□□□□□ -1.98
CLN3YAL040C UTP14Q04500 899 aaKnown RBP2.71□□□□□ -1.98
CLN3YAL040C SGD1Q06132 899 aa2.71□□□□□ -1.98
CLN3YAL040C BDF2Q07442 638 aa2.71□□□□□ -1.98
CLN3YAL040C SSP2Q08646 371 aa2.71□□□□□ -1.98
CLN3YAL040C HKR1P41809 1802 aa2.7□□□□□ -1.98
CLN3YAL040C PRE10P21242 288 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
CLN3YAL040C GRX1P25373 110 aaKnown RBP2.7□□□□□ -1.98
CLN3YAL040C KIP1P28742 1111 aa2.7□□□□□ -1.98
CLN3YAL040C PBP2P38151 413 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
CLN3YAL040C PMC1P38929 1173 aaPredicted RBP2.7□□□□□ -1.98
CLN3YAL040C PIK1P39104 1066 aa2.7□□□□□ -1.98
CLN3YAL040C MAD1P40957 749 aa2.7□□□□□ -1.98
CLN3YAL040C SEC26P41810 973 aaKnown RBP2.7□□□□□ -1.98
CLN3YAL040C SPT20P50875 604 aa2.7□□□□□ -1.98
CLN3YAL040C HXT17P53631 564 aa2.7□□□□□ -1.98
CLN3YAL040C UBP16Q02863 499 aa2.7□□□□□ -1.98
CLN3YAL040C HOS3Q02959 697 aaKnown RBP2.7□□□□□ -1.98
CLN3YAL040C YDR132CQ03900 495 aa2.7□□□□□ -1.98
CLN3YAL040C ESF1Q06344 628 aaKnown RBP2.7□□□□□ -1.98
CLN3YAL040C NYV1Q12255 253 aa2.7□□□□□ -1.98
CLN3YAL040C PTC5Q12511 572 aa2.7□□□□□ -1.98
CLN3YAL040C CTS1P29029 562 aa2.69□□□□□ -1.98
CLN3YAL040C AFG2P32794 780 aa2.69□□□□□ -1.98
CLN3YAL040C MNR2P35724 969 aa2.69□□□□□ -1.98
CLN3YAL040C GPB2P39717 880 aa2.69□□□□□ -1.98
CLN3YAL040C HXT13P39924 564 aa2.69□□□□□ -1.98
CLN3YAL040C RPN3P40016 523 aaKnown RBP2.69□□□□□ -1.98
CLN3YAL040C RIX7Q07844 837 aaKnown RBP2.69□□□□□ -1.98
CLN3YAL040C CTI6Q08923 506 aa2.69□□□□□ -1.98
CLN3YAL040C YPL260WQ08977 551 aa2.69□□□□□ -1.98
CLN3YAL040C WRS1Q12109 432 aaKnown RBP2.69□□□□□ -1.98
CLN3YAL040C YGR161W-CQ3E744 92 aa2.69□□□□□ -1.98
CLN3YAL040C RAD50P12753 1312 aa2.69□□□□□ -1.98
CLN3YAL040C SSK22P25390 1331 aaPredicted RBP2.69□□□□□ -1.98
CLN3YAL040C FIG2P25653 1609 aa2.69□□□□□ -1.98
CLN3YAL040C NOT3P06102 836 aaKnown RBP2.68□□□□□ -1.98
CLN3YAL040C CDC16P09798 840 aa2.68□□□□□ -1.98
CLN3YAL040C CAF20P12962 161 aaKnown RBP2.68□□□□□ -1.98
CLN3YAL040C PUF4P25339 888 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
CLN3YAL040C ABZ1P37254 787 aaPredicted RBP2.68□□□□□ -1.98
CLN3YAL040C SHM2P37291 469 aaKnown RBP2.68□□□□□ -1.98
CLN3YAL040C BAP2P38084 609 aa2.68□□□□□ -1.98
CLN3YAL040C LAM1P38851 1228 aa2.68□□□□□ -1.98
CLN3YAL040C FAA3P39002 694 aa2.68□□□□□ -1.98
CLN3YAL040C MNN1P39106 762 aa2.68□□□□□ -1.98
CLN3YAL040C YFR016CP43597 1233 aaKnown RBP2.68□□□□□ -1.98
CLN3YAL040C YJR142WP47173 342 aa2.68□□□□□ -1.98
CLN3YAL040C PIB2P53191 635 aa2.68□□□□□ -1.98
CLN3YAL040C MRPS35P53292 345 aa2.68□□□□□ -1.98
CLN3YAL040C GCN5Q03330 439 aa2.68□□□□□ -1.98
CLN3YAL040C CEF1Q03654 590 aaPredicted RBP2.68□□□□□ -1.98
CLN3YAL040C CDC53Q12018 815 aaKnown RBP2.68□□□□□ -1.98
CLN3YAL040C SPO21Q12411 609 aa2.68□□□□□ -1.98
CLN3YAL040C YOR131CQ12486 218 aa2.68□□□□□ -1.98
CLN3YAL040C HXK1P04806 485 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms