RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 FOXR1Q6PIV2 292 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 LRRC69Q6ZNQ3 347 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 HSH2DQ96JZ2 352 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 TRERF1Q96PN7 1200 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 SAP130Q9H0E3 1048 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 C11orf16Q9NQ32 467 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 KLF15Q9UIH9 416 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 PHF24Q9UPV7 400 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 CHMP3Q9Y3E7 222 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 IGF1RP08069 1367 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 WIZO95785 1651 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 NPR3P17342 541 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 INPP5BP32019 993 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 CTBSQ01459 385 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 ARSJQ5FYB0 599 aaPredicted RBP5.99□□□□□ -1.45
CDKL5-208ENST00000624953 BTLAQ7Z6A9 289 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 ACDQ96AP0 544 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 ANKIB1Q9P2G1 1089 aa5.99□□□□□ -1.45
CDKL5-208ENST00000624953 DNMT3AQ9Y6K1 912 aaPredicted RBP5.99□□□□□ -1.45
CDKL5-208ENST00000624953 MRC2Q9UBG0 1479 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 OPLAHO14841 1288 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 ITGB2P05107 769 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 ARAFP10398 606 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 HOXB4P17483 251 aaPredicted RBP5.98□□□□□ -1.45
CDKL5-208ENST00000624953 MX2P20592 715 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 C11orf91Q3C1V1 193 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 C1orf229Q6ZS94 237 aaPredicted RBP5.98□□□□□ -1.45
CDKL5-208ENST00000624953 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 CHMP7Q8WUX9 453 aaPredicted RBP5.98□□□□□ -1.45
CDKL5-208ENST00000624953 CNTNAP5Q8WYK1 1306 aa5.98□□□□□ -1.45
CDKL5-208ENST00000624953 CARNS1A5YM72 827 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
CDKL5-208ENST00000624953 GRIN2CQ14957 1233 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 C16orf46Q6P387 395 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 BICDL1Q6ZP65 573 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 ETFBKMTQ8IXQ9 262 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 KLK14Q9P0G3 267 aa5.97□□□□□ -1.45
CDKL5-208ENST00000624953 DCDC2BA2VCK2 349 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 EGFRP00533 1210 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 DGKZQ13574 1117 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 ZNF468Q5VIY5 522 aaPredicted RBP5.96□□□□□ -1.46
CDKL5-208ENST00000624953 SLCO4C1Q6ZQN7 724 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 EFCC1Q9HA90 598 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 MARK1Q9P0L2 795 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 SEPT3Q9UH03 358 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 PDS5BQ9NTI5 1447 aa5.96□□□□□ -1.46
CDKL5-208ENST00000624953 KHNYNO15037 678 aaKnown RBP5.95□□□□□ -1.46
CDKL5-208ENST00000624953 OIP5O43482 229 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 CD33P20138 364 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 SCNN1AP37088 669 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 ECM1Q16610 540 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 TXNDC2Q86VQ3 553 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 HELQQ8TDG4 1101 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 SCARF2Q96GP6 870 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-208ENST00000624953 NGLY1Q96IV0 654 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 OXCT2Q9BYC2 517 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-208ENST00000624953 BRD7Q9NPI1 651 aa5.95□□□□□ -1.46
CDKL5-208ENST00000624953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDKL5-208ENST00000624953 CHD1O14646 1710 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 SIN3BO75182 1162 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 MICAL2O94851 1124 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 BCRP11274 1271 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 MAP3K10Q02779 954 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 KANK3Q6NY19 840 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 FCHSD1Q86WN1 690 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 TNFRSF25Q93038 417 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 GDF2Q9UK05 429 aaPredicted RBP5.94□□□□□ -1.46
CDKL5-208ENST00000624953 KCNMB2Q9Y691 235 aa5.94□□□□□ -1.46
CDKL5-208ENST00000624953 SHISA8B8ZZ34 492 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 HOXD8P13378 290 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-208ENST00000624953 IDH3AP50213 366 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 PLA2G4EQ3MJ16 856 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 ILDR2Q71H61 639 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 GOLGA6L1Q8N7Z2 621 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 ARID3AQ99856 593 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 NSFL1CQ9UNZ2 370 aaKnown RBP5.93□□□□□ -1.46
CDKL5-208ENST00000624953 KCNH4Q9UQ05 1017 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
CDKL5-208ENST00000624953 ZBTB39O15060 712 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 EPXP11678 715 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 BMP4P12644 408 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 ARSDP51689 593 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 VTI1AQ96AJ9 217 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 DCAF5Q96JK2 942 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 CEP63Q96MT8 703 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 MKNK1Q9BUB5 465 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 STIM2Q9P246 746 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 GNEQ9Y223 722 aaKnown RBP5.92□□□□□ -1.46
CDKL5-208ENST00000624953 GJA3Q9Y6H8 435 aa5.92□□□□□ -1.46
CDKL5-208ENST00000624953 URB2Q14146 1524 aaKnown RBP5.92□□□□□ -1.46
CDKL5-208ENST00000624953 CEP164Q9UPV0 1460 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 ARHGEF11O15085 1522 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 MAP3K6O95382 1288 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 IGHA1P01876 353 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 BRD2P25440 801 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms