RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 LMOD3Q0VAK6 560 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 PDIA6Q15084 440 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 GPC2Q8N158 579 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 JDP2Q8WYK2 163 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 CACNA1SQ13698 1873 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
AP003108.2-208ENST00000543044 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
AP003108.2-208ENST00000543044 EPHX2P34913 555 aa11.73□□□□□ -0.53
AP003108.2-208ENST00000543044 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
AP003108.2-208ENST00000543044 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
AP003108.2-208ENST00000543044 PNMA8AQ86V59 439 aaPredicted RBP11.73□□□□□ -0.53
AP003108.2-208ENST00000543044 SCN4AP35499 1836 aa11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 ITGBL1O95965 494 aaPredicted RBP11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 NLRP3Q96P20 1036 aa11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
AP003108.2-208ENST00000543044 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 UTP14AQ9BVJ6 771 aaKnown RBP11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
AP003108.2-208ENST00000543044 NUP98P52948 1817 aa11.71□□□□□ -0.54
AP003108.2-208ENST00000543044 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
AP003108.2-208ENST00000543044 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 CHL1O00533 1208 aa11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 ANXA1P04083 346 aa11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 GJA3Q9Y6H8 435 aa11.69□□□□□ -0.54
AP003108.2-208ENST00000543044 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 BBOX1O75936 387 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 AIMP1Q12904 312 aaKnown RBP11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 NLRP10Q86W26 655 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 COL4A5P29400 1685 aa11.68□□□□□ -0.54
AP003108.2-208ENST00000543044 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 ABCC4O15439 1325 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 PPIP5K2O43314 1243 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 VEGFBP49765 207 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 SCNN1DP51172 638 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 DDX10Q13206 875 aaKnown RBP11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 TCIRG1Q13488 830 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 CCDC146Q8IYE0 955 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 RTFDC1Q9BY42 306 aaPredicted RBP11.67□□□□□ -0.54
AP003108.2-208ENST00000543044 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 HOXB7P09629 217 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 EPS15P42566 896 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 AOC3Q16853 763 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
AP003108.2-208ENST00000543044 SH3TC1Q8TE82 1336 aa11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 FOXN1O15353 648 aa11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 DDX46Q7L014 1031 aaKnown RBP11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 CHPF2Q9P2E5 772 aa11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 ZNRF3Q9ULT6 936 aa11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
AP003108.2-208ENST00000543044 CAPN15O75808 1086 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 GRAPQ13588 217 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 TMC4Q7Z404 712 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 MPNDQ8N594 471 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 GPRC5DQ9NZD1 345 aa11.64□□□□□ -0.55
AP003108.2-208ENST00000543044 DBF4Q9UBU7 674 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 285.2 ms