RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Ndufa8Q9DCJ5 172 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Topaz1E5FYH1 1653 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Cfap58B2RW38 873 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Gjb2Q00977 226 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Kif20bQ80WE4 1774 aaKnown RBP10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Mctp1E9PV86 951 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Birc3O08863 600 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Syt1P46096 421 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Esyt1Q3U7R1 1092 aaKnown RBP10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Usp48Q3V0C5 1052 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Nap1l3Q794H2 544 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Tsen34Q8BMZ5 316 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Myo1cQ9WTI7 1063 aa10.23□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Ccdc66Q6NS45 935 aa10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Irx5Q9JKQ4 484 aa10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Exoc6bA6H5Z3 810 aa10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 L1td1Q587J6 782 aaKnown RBP10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Ano8Q6PB70 1060 aa10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Noc3lQ8VI84 807 aaKnown RBP10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Zranb2Q9R020 330 aaKnown RBP10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 PplQ9R269 1755 aa10.22□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Zc3h13E9Q784 1729 aaKnown RBP10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Gsto1O09131 240 aa10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Cnnm3Q32NY4 713 aa10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Trak2Q6P9N8 913 aa10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Adck5Q80V03 582 aa10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 NaspQ99MD9 773 aaKnown RBP10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Rad50P70388 1312 aa10.21□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 CgnP59242 1191 aa10.21□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Lins1Q3U1D0 764 aa10.21□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ddx17Q501J6 650 aaKnown RBP10.21□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ctr9Q62018 1173 aaKnown RBP10.21□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Tpm4Q6IRU2 248 aa10.21□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Kcnd1Q03719 651 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Nol10Q5RJG1 687 aaKnown RBP10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Wdr3Q8BHB4 942 aaKnown RBP10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Klhdc4Q921I2 584 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Snw1Q9CSN1 536 aaKnown RBP10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Mlh1Q9JK91 760 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Aox4Q3TYQ9 1336 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Anks1aP59672 1150 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 OptnQ8K3K8 584 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Atg3Q9CPX6 314 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Cwc15Q9JHS9 229 aaKnown RBP10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Chaf1aQ9QWF0 911 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Nphp1Q9QY53 687 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 CemipQ8BI06 1361 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Calcoco2A2A6M5 331 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Btn2a2A4QPC6 514 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Gm10563F6WIE4 79 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Samsn1P57725 372 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Q3UJC8 639 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Mns1Q61884 491 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Slu7Q8BHJ9 585 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Sh3bgrQ9WUZ7 214 aa10.2□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Atp8b3Q6UQ17 1335 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Idi1P58044 227 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Trim28Q62318 834 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 HypkQ9CR41 129 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Osbpl5Q9ER64 874 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Map3k19E9Q3S4 1311 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Mcm6P97311 821 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Spata16Q8C636 571 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Frat2Q8K025 231 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 MycbpQ9EQS3 103 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Cnpy2Q9QXT0 182 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Nphp3Q7TNH6 1325 aa10.19□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Znf568E9PYI1 671 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Chl1P70232 1209 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Map9Q3TRR0 646 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Panx2Q6IMP4 677 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Srgap3Q812A2 1099 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ano10Q8BH79 659 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Tmx4Q8C0L0 335 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Nwd1A6H603 1563 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Actn3O88990 900 aaKnown RBP10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Leo1Q5XJE5 667 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 PzpQ61838 1495 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 GphnQ8BUV3 769 aaKnown RBP10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Fsd2Q8BZ52 692 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ints4Q8CIM8 964 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Kcnk13Q8R1P5 405 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Scn4aQ9ER60 1841 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Stk3Q9JI10 497 aa10.18□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Pik3c2bE9QAN8 1632 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ktn1Q61595 1327 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 MpripP97434 1024 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ccdc102aQ3TMW1 549 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Ice2Q3UZ18 988 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Klra4Q60651 263 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Cabp2Q9JLK4 216 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Plekhg1F6S200 1446 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Tpx2A2APB8 745 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 RargP18911 458 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Plcb3P51432 1234 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Recql4Q75NR7 1216 aaKnown RBP10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Tti2Q8BGV4 512 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Slc35g1Q8BY79 368 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 Zfp113Q8C689 439 aa10.17□□□□□ -0.78
Pdgfra-208ENSMUST00000202681 DonsonQ9QXP4 560 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms