RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Wdhd1P59328 1117 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Prom2Q3UUY6 835 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Nphp1Q9QY53 687 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Kiaa0232Q80U59 1396 aaKnown RBP11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Lrp5Q91VN0 1614 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Slurp2P0DP59 97 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Wwc1Q5SXA9 1104 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Tmem87bQ8BKU8 555 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Emilin1Q99K41 1017 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Ambra1A2AH22 1300 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 4931408C20RikE9PWP9 1381 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Pa2g4P50580 394 aaKnown RBP11□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Cct4P80315 539 aaKnown RBP11□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Smc5Q8CG46 1101 aaKnown RBP11□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Prl3d3A0A0M6L0J6 224 aa10.99□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 SkilQ60665 675 aa10.99□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Atl3Q91YH5 541 aa10.99□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Col4a5Q63ZW6 1691 aa10.99□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Znf609Q8BZ47 1413 aa10.99□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 SafbD3YXK2 937 aaKnown RBP10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Jarid2Q62315 1234 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Q8C5K5 320 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 St5Q924W7 1134 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Rtn4Q99P72 1162 aaKnown RBP10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 CarsQ9ER72 831 aaKnown RBP10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Abcc4E9Q236 1325 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Mcmdc2E9Q956 681 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Mtcl1Q3UHU5 1945 aa10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Znfx1Q8R151 1909 aaKnown RBP10.98□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 EvplQ9D952 2035 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Eva1cP58659 440 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Rbm27Q5SFM8 1060 aaKnown RBP10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Itga6Q61739 1091 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Sf3b3Q921M3 1217 aaKnown RBP10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Sh3tc1G3X9F6 1346 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Aknad1E9Q8N6 675 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Zbtb3Q91X45 518 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Chmp3Q9CQ10 224 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Gja10Q9WUS4 505 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Itgb4A2A863 1818 aa10.97□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 LifrP42703 1092 aa10.96□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Strip1Q8C079 837 aa10.96□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Frmpd3A0A140LIW3 1774 aa10.96□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Sult6b1P0CC03 303 aa10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 AppP12023 770 aa10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Snrpa1P57784 255 aaKnown RBP10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Wdr43Q6ZQL4 677 aaKnown RBP10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Aldh8a1Q8BH00 487 aa10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Plcd4Q8K3R3 807 aa10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 FanclQ9CR14 375 aa10.96□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Nup188Q6ZQH8 1759 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 EappQ5BU09 281 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Slc38a10Q5I012 1090 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atxn2lQ7TQH0 1049 aaKnown RBP10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Rbm5Q91YE7 815 aaKnown RBP10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Smarca5Q91ZW3 1051 aaKnown RBP10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Kif2cQ922S8 721 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Mtfr1lQ9CWE0 289 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Scn11aQ9R053 1765 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atg4a-psA0A0G2JFS9 396 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Eya2O08575 532 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ets1P27577 440 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ppp4r3aQ6P2K6 820 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atg4aQ8C9S8 396 aa10.95□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Nup98Q6PFD9 1816 aaKnown RBP10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Myo3bQ1EG27 1305 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Gm7347D3YYI9 267 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Speer4aF8VPX6 267 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ftl2P49945 183 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atg9aQ68FE2 551 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Cgnl1Q6AW69 1298 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Dhx38Q80X98 1228 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ciao1Q99KN2 339 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Chmp5Q9D7S9 219 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 LratQ9JI60 231 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Phrf1A6H619 1682 aa10.94□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Slc4a3P16283 1227 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Gpr182P43142 395 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 VeztQ3ZK22 780 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Gpr150Q8BL07 427 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Cetn4Q8K4K1 168 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ncoa5Q91W39 579 aaKnown RBP10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Gcc1Q9D4H2 778 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Brpf1B2RRD7 1212 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 PsdQ5DTT2 1024 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Dis3l2Q8CI75 870 aaKnown RBP10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Sde2Q8K1J5 448 aaKnown RBP10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Tmc2Q8R4P4 888 aa10.93□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Col3a1P08121 1464 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ube4aE9Q735 1028 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Anxa1P10107 346 aaKnown RBP10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Nlrp1aQ2LKU9 1182 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ccdc27Q3V036 639 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Supt16hQ920B9 1047 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Rrs1Q9CYH6 365 aaKnown RBP10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Adarb2Q9JI20 745 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Plekho1Q9JIY0 408 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Myh15E9Q264 1925 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Kdm3aQ6PCM1 1323 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Bin2D3Z6Q9 489 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms