RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ifit1bl2Q3U687 466 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Cdca8Q8BHX3 289 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Tmem87bQ8BKU8 555 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Krt84Q99M73 603 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Topbp1Q6ZQF0 1515 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Slc35g1Q8BY79 368 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Dnajc5gQ8C632 165 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ttc21aQ8C0S4 1314 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Q4VA45 678 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ano8Q6PB70 1060 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Riok1Q922Q2 567 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Mmel1Q9JLI3 765 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 FancaQ9JL70 1439 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 A0A0U1RNP2 1173 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Mcm3P25206 812 aaKnown RBP11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Limch1Q3UH68 1057 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Lamb3Q61087 1168 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Aldh1l2Q8K009 923 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Kdm4cQ8VCD7 1054 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ncapd2Q8K2Z4 1392 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Stx1aO35526 288 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Pms1Q8K119 917 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Hmg20bQ9Z104 317 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 EappQ5BU09 281 aa11.56□□□□□ -0.56
Ldlr-201ENSMUST00000034713 ItpripQ3TNL8 555 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Washc4Q3UMB9 1173 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Gnl2Q99LH1 728 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Rrs1Q9CYH6 365 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 PtpruB1AUH1 1446 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Cyp26c1B2RXA7 518 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Zap70P43404 618 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ell2Q3UKU1 639 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Rbm26Q6NZN0 1012 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Fam193aQ8CGI1 1231 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Slc26a8Q8R0C3 999 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Fam13aQ8BGI4 693 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Znf771Q8BJ90 317 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Fsd2Q8BZ52 692 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Bcar3Q9QZK2 820 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Eif5P59325 429 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Nucb1Q02819 459 aaKnown RBP11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Kdm4aQ8BW72 1064 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Atf7Q8R0S1 413 aa11.55□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Tmem2Q5FWI3 1383 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Adamts13Q769J6 1426 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Clcn1Q64347 994 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Tmx3Q8BXZ1 456 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ccdc96Q9CR92 584 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Mtmr3Q8K296 1196 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Stxbp4Q9WV89 557 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Pdia3P27773 505 aaKnown RBP11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Gimap8Q75N62 688 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ccdc43Q9CR29 222 aaKnown RBP11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Uhrf1bp1lA2RSJ4 1457 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Mroh1E0CZ22 1640 aa11.54□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Frmd3Q8BHD4 595 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Trim11Q99PQ2 467 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ccdc191J3QQ27 883 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Mctp2Q5RJH2 878 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Adck5Q80V03 582 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Maats1Q8BRC6 783 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ktn1Q61595 1327 aaKnown RBP11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 InhbeO08717 350 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Usp25P57080 1055 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Pafah1b1P63005 410 aaKnown RBP11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ehmt1Q5DW34 1296 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ttc41Q692V3 1318 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Bloc1s2Q9CWG9 143 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Pdzd9Q9D9M4 266 aa11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Bag3Q9JLV1 577 aaKnown RBP11.53□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Myo5cE9Q1F5 1742 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Arhgef28P97433 1693 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Iqgap1Q9JKF1 1657 aaKnown RBP11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Erbb3Q61526 1339 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ppfia1B2RXQ2 1266 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Abcd1P48410 736 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 AidaQ8C4Q6 305 aa11.52□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Uri1Q3TLD5 531 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Zc3h12cQ5DTV4 884 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc66Q6NS45 935 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Erlin2Q8BFZ9 340 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Vps53Q8CCB4 832 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc150Q8CDI7 1110 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Zscan20B2KFW1 1030 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cfap73J3QPZ5 306 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Dync1i1O88485 628 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Grm8P47743 908 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc39Q9D5Y1 937 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc94Q9D6J3 314 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Nphp3Q7TNH6 1325 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Nap1l1P28656 391 aaKnown RBP11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Lrrfip1Q3UZ39 729 aaKnown RBP11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Morc2aQ69ZX6 1030 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 GptQ8QZR5 496 aa11.52□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc162pQ0VG85 912 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cep135Q6P5D4 1140 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Tmc2Q8R4P4 888 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Lmbr1lQ9D1E5 489 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Kdm3aQ6PCM1 1323 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Arid4aF8VPQ2 1261 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms