RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Il1rapl2Q9ERS6 686 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gbp2Q9Z0E6 589 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gas8Q60779 478 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Tshz3Q8CGV9 1081 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Kdm2bQ6P1G2 1309 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ube3aO08759 870 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Clcn1Q64347 994 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gm21985Q6P6P5 1106 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Slc12a5Q91V14 1138 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Pdia3P27773 505 aaKnown RBP26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Tbc1d8bA3KGB4 1114 aa26.44■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ms4a1P19437 291 aa26.43■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ppp1r10Q80W00 888 aaKnown RBP26.43■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Pde4bB1AWC9 736 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Cavin2Q63918 418 aaKnown RBP26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Sdad1Q80UZ2 687 aaKnown RBP26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Lman1Q9D0F3 517 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ssrp1Q08943 708 aaKnown RBP26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gm14025A2AP89 1413 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gigyf2Q6Y7W8 1291 aaKnown RBP26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Igf2bp2Q5SF07 592 aaKnown RBP26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 RragbQ6NTA4 374 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ttc12Q8BW49 704 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Bloc1s4Q8VED2 215 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Syce1Q9D495 329 aa26.42■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Top2bQ64511 1612 aa26.41■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Kiaa1524Q8BWY9 907 aa26.41■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Magi1Q6RHR9 1471 aa26.41■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 NgdnQ9DB96 315 aaKnown RBP26.41■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ctnna2Q61301 953 aa26.41■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Cul5Q9D5V5 780 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Echdc1Q9D9V3 322 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Egfl6Q9JJZ5 550 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Uso1Q9Z1Z0 959 aaKnown RBP26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ccdc170D3YXL0 722 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 U2af1l4Q8BGJ9 220 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gm28510A0A087WP28 240 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Arhgef6Q8K4I3 771 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Krt79Q8VED5 531 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ripk4Q9ERK0 786 aa26.4■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Kmt5bQ3U8K7 883 aa26.39■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ltv1Q6NSQ7 470 aaKnown RBP26.39■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Gzf1Q4VBD9 706 aa26.39■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Ccdc122Q8BVN0 290 aa26.39■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Prpf40aQ9R1C7 953 aaKnown RBP26.39■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Rassf2Q8BMS9 326 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Tmem266Q8BZB3 538 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Tmem132aQ922P8 1018 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Tmco5aQ9D9D5 303 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 PtprkP35822 1457 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Sf3b2Q3UJB0 878 aaKnown RBP26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Hoxb7P09024 217 aa26.38■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Vgll3P85442 326 aa26.37■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Luc7l2Q7TNC4 392 aaKnown RBP26.37■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Rbm8a2A0A0N4SUH6 174 aa26.37■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Esyt1Q3U7R1 1092 aaKnown RBP26.37■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Rbm8aQ9CWZ3 174 aa26.37■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Nucb1Q02819 459 aaKnown RBP26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Ddx27Q921N6 760 aaKnown RBP26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Akap8Q9DBR0 687 aaKnown RBP26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Krt7Q9DCV7 457 aa26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Tnip1Q9WUU8 647 aa26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Rsrc1Q9DBU6 334 aa26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Fam135bQ9DAI6 1403 aa26.36■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Cnnm2Q3TWN3 875 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Mindy4Q3UQI9 744 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Krt15Q61414 452 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 AmfrQ9R049 643 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Slx4ipQ9D7Y9 413 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Soga3Q6NZL0 945 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Sptlc2P97363 560 aaKnown RBP26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Map3k11Q80XI6 850 aa26.35■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Apol7aB2RT54 418 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Ankrd40Q5SUE8 363 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Lrsam1Q80ZI6 727 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Idi2Q8BFZ6 227 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Haus2Q9CQS9 234 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Fam114a1Q9D281 569 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Atp8b2P98199 1209 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Map3k2Q61083 619 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Cplx4Q80WM3 160 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Rai14Q9EP71 979 aaKnown RBP26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Dpf1Q9QX66 387 aa26.34■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Fam186bD3Z420 943 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Aldh1l2Q8K009 923 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Cep19Q9CQA8 163 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Ebag9Q9D0V7 213 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 FanclQ9CR14 375 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Gm10378F6XQQ1 160 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Evi5lH3BKQ3 813 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Atp1a4Q9WV27 1032 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Hmgb1P63158 215 aaKnown RBP26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Cers3Q1A3B0 383 aa26.33■■□□□ 1.81
Sh3rf1-201ENSMUST00000034060 Lekr1B2RVN1 116 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Dnm1P39053 867 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Krt25Q8VCW2 446 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Vps16Q920Q4 839 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 TrdnE9Q9K5 693 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Tex35Q14BK3 207 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Spa17Q62252 149 aa26.32■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms