RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 TrhQ62361 256 aa12.46□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Rbm28Q8CGC6 750 aaKnown RBP12.46□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Tpx2A2APB8 745 aaKnown RBP12.46□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Vps37cQ8R105 352 aa12.46□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Irx4Q9QY61 515 aa12.46□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ppp6r1Q7TSI3 856 aa12.46□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ciz1Q8VEH2 845 aa12.46□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Dip2bQ3UH60 1574 aa12.46□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zcchc17Q9ESX4 241 aaKnown RBP12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Atf7ipQ7TT18 1306 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Atg4a-psA0A0G2JFS9 396 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 A0A1L1SQF0 893 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Btn2a2A4QPC6 514 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 GphnQ8BUV3 769 aaKnown RBP12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Rps6ka5Q8C050 863 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Atg4aQ8C9S8 396 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Paf1Q8K2T8 535 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 MicalclQ9D5U9 680 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 PzpQ61838 1495 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Odf2A3KGV1 830 aaKnown RBP12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zfp51Q3U4L8 781 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Q66JV7 365 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ccdc12Q8R344 166 aaKnown RBP12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Kdm4cQ8VCD7 1054 aa12.45□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Syt1P46096 421 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Chpf2Q3UU43 768 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Stac3Q8BZ71 360 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ctdp1Q7TSG2 960 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 DonsonQ9QXP4 560 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Gjc1P28229 396 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ddit3P35639 168 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Fam177a1Q8BR63 207 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ptcd1Q8C2E4 695 aaKnown RBP12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Gtpbp4Q99ME9 634 aaKnown RBP12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 HnrnpmQ9D0E1 729 aaKnown RBP12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ap3b2Q9JME5 1082 aa12.44□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ccp110Q7TSH4 1004 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Znf131Q8K3J5 619 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Rbm19Q8R3C6 952 aaKnown RBP12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Stxbp4Q9WV89 557 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Cplx2P84086 134 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ddx46Q569Z5 1032 aaKnown RBP12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Pdlim2Q8R1G6 349 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Smc1bQ920F6 1248 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Slit3Q9WVB4 1523 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Rbm8a2A0A0N4SUH6 174 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zfpm1O35615 995 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Dync1i1O88485 628 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Hs1bp3Q3TC93 395 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ddx58Q6Q899 926 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ccdc93Q7TQK5 629 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Rbm8aQ9CWZ3 174 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Abca14E9Q8F8 1683 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Brpf3B2KF05 1204 aaKnown RBP12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Usp19Q3UJD6 1360 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ncbp1Q3UYV9 790 aaKnown RBP12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Jakmip3Q5DTN8 844 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Smc2Q8CG48 1191 aaKnown RBP12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Pik3r4Q8VD65 1358 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Bcl9Q9D219 1425 aa12.43□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Nsd3Q6P2L6 1439 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Strn4P58404 760 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Rrs1Q9CYH6 365 aaKnown RBP12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Eif3aP23116 1344 aaKnown RBP12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Gm10471E9Q1C7 252 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Cnnm1Q0GA42 951 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Tti2Q8BGV4 512 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Slc13a4Q8BZ82 625 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Srek1Q8BZX4 494 aaKnown RBP12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Wdr24Q8CFJ9 790 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Matr3Q8K310 846 aaKnown RBP12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Tmc2Q8R4P4 888 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Cdca7lQ922M5 438 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 4930407I10RikD3Z5T8 1512 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Znf568E9PYI1 671 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ccne1Q61457 408 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 MlecQ6ZQI3 291 aaKnown RBP12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ano1Q8BHY3 960 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Lztfl1Q9JHQ5 299 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 P2rx7Q9Z1M0 595 aa12.42□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Atp2b1G5E829 1220 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 CrcpO35427 148 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ccdc155Q80VJ8 648 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Igbp1bQ9QZ29 343 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Nfe2l3Q9WTM4 660 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 NinlQ6ZQ12 1394 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Nrxn1Q9CS84 1514 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Cep120Q7TSG1 988 aa12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Mrps27Q8BK72 415 aaKnown RBP12.41□□□□□ -0.42
Rnf40-201ENSMUST00000033088 IghaA0A0A6YXW6 389 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Evi5lH3BKQ3 813 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Fyb1O35601 819 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zdhhc9P59268 364 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Cep112Q5PR68 954 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ddx19aQ61655 478 aaKnown RBP12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Necab1Q8BG18 352 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Mdm2P23804 489 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zkscan4Q5SZT6 480 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Larp1Q6ZQ58 1072 aaKnown RBP12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Zscan22Q8BGS5 496 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms