RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Gm21698A0A087WQP8 267 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Kcng1A2BDX4 514 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ppfia1B2RXQ2 1266 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Gm21671G3UY31 267 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Polr3gQ6NXY9 223 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Chmp7Q8R1T1 451 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Fam84aQ9D650 292 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Nol7Q9D7Z3 254 aaKnown RBP12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Pdzd9Q9D9M4 266 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Stx6Q9JKK1 255 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Scn4aQ9ER60 1841 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 NmiO35309 314 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Syt1P46096 421 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Grm8P47743 908 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Atf3Q60765 181 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Q9D9S1 216 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Kdm6aO70546 1401 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Rbm8a2A0A0N4SUH6 174 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Kank4Q6P9J5 1016 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Rbm8aQ9CWZ3 174 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Aox2Q5SGK3 1345 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Siglec1Q62230 1695 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ugt1a5B2RT14 529 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ercc3P49135 783 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Adora1Q60612 326 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Pip4k2bQ80XI4 416 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Rps6ka5Q8C050 863 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Dlg5E9Q9R9 1921 aa12.72□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 GpkowQ56A08 488 aa12.71□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Zfp251Q6PCX8 632 aa12.71□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Dixdc1Q80Y83 711 aa12.71□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ccdc96Q9CR92 584 aa12.71□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Nup153E9Q3G8 1462 aaKnown RBP12.71□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Becn1O88597 448 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Atp2b3Q0VF55 1220 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Mkrn3Q60764 544 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ccdc66Q6NS45 935 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 OptnQ8K3K8 584 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ccar2Q8VDP4 922 aaKnown RBP12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 TnrQ8BYI9 1358 aa12.71□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Utp3Q9JI13 469 aaKnown RBP12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ak2Q9WTP6 239 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Strn4P58404 760 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Gzf1Q4VBD9 706 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ddx11Q6AXC6 880 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Noc3lQ8VI84 807 aaKnown RBP12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Nid2O88322 1403 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ltbp4Q8K4G1 1666 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Rassf8Q8CJ96 419 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ccdc7Q9D541 371 aa12.7□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 ThemisQ8BGW0 636 aa12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Pdia6Q922R8 440 aaKnown RBP12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Atg3Q9CPX6 314 aa12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Bag3Q9JLV1 577 aaKnown RBP12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Cd22P35329 862 aa12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Q8C5K5 320 aa12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Taf7Q9R1C0 341 aa12.69□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Cnnm3Q32NY4 713 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Vps54Q5SPW0 977 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ddx19aQ61655 478 aaKnown RBP12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 MsnP26041 577 aaKnown RBP12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Sh3bp1P55194 680 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ddx46Q569Z5 1032 aaKnown RBP12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Add2Q9QYB8 725 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Gli3Q61602 1583 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Col15a1O35206 1367 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Abcc4E9Q236 1325 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Larp1Q6ZQ58 1072 aaKnown RBP12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Chmp3Q9CQ10 224 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Pus3Q9JI38 481 aa12.68□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Mst1rQ62190 1378 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 AceP09470 1312 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Igflr1Q3U4N7 345 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ltv1Q6NSQ7 470 aaKnown RBP12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Sh3bp5Q9Z131 463 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Rnf123Q5XPI3 1314 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Zmynd15Q8C0R7 736 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ccdc178Q8CDV0 866 aa12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Sf3a1Q8K4Z5 791 aaKnown RBP12.67□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Soga3Q6NZL0 945 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ppp6r1Q7TSI3 856 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Wdr78E9PYY5 807 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Kdm4aQ8BW72 1064 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 CrebrfQ8CDG5 640 aaKnown RBP12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Fez1Q8K0X8 392 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 TefQ9JLC6 301 aa12.66□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 CrklP47941 303 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Pnma3Q8JZW8 466 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Iffo2Q8R2V2 512 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 TkfcQ8VC30 578 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Speer4bQ9D9F7 267 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Atp10bB1AWN4 1474 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Tmed8Q3UHI4 326 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Sgsm2Q80U12 1005 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Rrs1Q9CYH6 365 aaKnown RBP12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Phkg2Q9DB30 406 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Ica1lQ3TY65 431 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Snx13Q6PHS6 957 aa12.65□□□□□ -0.38
Ptcd1-201ENSMUST00000031628 Adcy5P84309 1262 aa12.64□□□□□ -0.39
Ptcd1-201ENSMUST00000031628 Gpatch11Q3UFS4 262 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 75.3 ms