RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 EQTNQ9NQ60 294 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 ENTPD4Q9Y227 616 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 LRP4O75096 1905 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 PCDHGA12O60330 932 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 GUCY1B2O75343 617 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 MFN2O95140 757 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 HMGN2P05204 90 aaKnown RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 CCDC159P0C7I6 412 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 MAOBP27338 520 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 ENTPD1P49961 510 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 CCR5P51681 352 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 GP2P55259 537 aaKnown RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 NUP107P57740 925 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 BNIP3Q12983 259 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 TOP3AQ13472 1001 aaPredicted RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 UBXN2BQ14CS0 331 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 NPTX1Q15818 432 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 WDR53Q7Z5U6 358 aaPredicted RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 RBM45Q8IUH3 476 aaKnown RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 FAM46DQ8NEK8 389 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 OR10G2Q8NGC3 310 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 KAT2AQ92830 837 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 COL26A1Q96A83 441 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 NIPSNAP1Q9BPW8 284 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 TREX2Q9BQ50 279 aaPredicted RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 SLC2A4RGQ9NR83 387 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 MRPS2Q9Y399 296 aaKnown RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 FAM32AQ9Y421 112 aaKnown RBP16.47■□□□□ 0.23
SNX17-210ENST00000537606 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
SNX17-210ENST00000537606 IGLV3-19P01714 112 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 MAD2L1BPQ15013 274 aaPredicted RBP16.46■□□□□ 0.23
SNX17-210ENST00000537606 PRSS41Q7RTY9 318 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 VANGL1Q8TAA9 524 aaPredicted RBP16.46■□□□□ 0.23
SNX17-210ENST00000537606 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 TANKQ92844 425 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 MUL1Q969V5 352 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 GAL3ST3Q96A11 431 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 ZNF347Q96SE7 839 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 PRO3102Q9H379 93 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 THSD1Q9NS62 852 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 ANKMY1Q9P2S6 941 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 KCNE3Q9Y6H6 103 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 A0A1W2PPC4 97 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 B4DGG1 531 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 NR2F1P10589 423 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 CSNK2A2P19784 350 aaPredicted RBP16.46■□□□□ 0.23
SNX17-210ENST00000537606 KRT20P35900 424 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 MC3RP41968 323 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 XCR1P46094 333 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 LIM2P55344 173 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 HPCAP84074 193 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 NFATC3Q12968 1075 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 ELOAQ14241 798 aaKnown RBP16.46■□□□□ 0.23
SNX17-210ENST00000537606 CCDC81Q6ZN84 652 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 LGI4Q8N135 537 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 OR4C15Q8NGM1 316 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 THAP11Q96EK4 314 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 KLHDC7BQ96G42 594 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 APOL4Q9BPW4 351 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 ORAI3Q9BRQ5 295 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 FUNDC2Q9BWH2 189 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 FOXQ1Q9C009 403 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 STARD5Q9NSY2 213 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 ACER3Q9NUN7 267 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 PCDHGA6Q9Y5G7 932 aa16.46■□□□□ 0.23
SNX17-210ENST00000537606 FAM227AF5H4B4 570 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 DPM1O60762 260 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 NOL3O60936 208 aaKnown RBP16.45■□□□□ 0.22
SNX17-210ENST00000537606 WBP4O75554 376 aaKnown RBP16.45■□□□□ 0.22
SNX17-210ENST00000537606 IFNW1P05000 195 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 ITGA2P17301 1181 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 CCNA2P20248 432 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 EMP3P54852 163 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 UBE2IP63279 158 aaKnown RBP16.45■□□□□ 0.22
SNX17-210ENST00000537606 SIM1P81133 766 aaPredicted RBP16.45■□□□□ 0.22
SNX17-210ENST00000537606 TGM3Q08188 693 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 ENTHD1Q8IYW4 607 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 FAR1Q8WVX9 515 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 APH1BQ8WW43 257 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 ZNF566Q969W8 418 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 TM4SF19Q96DZ7 209 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 POT1Q9NUX5 634 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 NAALAD2Q9Y3Q0 740 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 PCDHGA10Q9Y5H3 936 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 ENPP4Q9Y6X5 453 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 COL6A3P12111 3177 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 IGHV1OR15-9A0A0B4J2B8 117 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 H0YGG7 62 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 M0R129 80 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 FFAR1O14842 300 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 TNFSF14O43557 240 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 HCRTR1O43613 425 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 SEMA7AO75326 666 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 NR2F6P10588 404 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 ARF3P61204 181 aaPredicted RBP16.45■□□□□ 0.22
SNX17-210ENST00000537606 SLC35A2P78381 396 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 RUNX2Q13950 521 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 AP1ARQ63HQ0 302 aa16.45■□□□□ 0.22
SNX17-210ENST00000537606 COMTD1Q86VU5 262 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms