RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G RPL8BP29453 256 aaKnown RBP3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G TFB1P32776 642 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G STE5P32917 917 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G UBP11P36026 717 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G SAP190P36123 1033 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G YBR238CP38330 731 aaKnown RBP3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G NEM1P38757 446 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G YAP1801P38856 637 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G CHS6P40955 746 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G LAM5P43560 674 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G GYP8P43570 497 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G HUL5P53119 910 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G GDE1Q02979 1223 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G WHI4Q07655 649 aaKnown RBP3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G OXR1Q08952 273 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G NCR1Q12200 1170 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G WHI2P12611 486 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G SRP54P20424 541 aaKnown RBP3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G MRF1P30775 413 aaPredicted RBP3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G MNR2P35724 969 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G HEL1P36113 551 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G RRP8P38961 392 aaKnown RBP3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G VID28P40547 921 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G PIB2P53191 635 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G MDR1P53258 950 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G RPS15Q01855 142 aaKnown RBP3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G DOT1Q04089 582 aaKnown RBP3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G RLF2Q12495 606 aa3.78□□□□□ -1.8
tC(GCA)GtC(GCA)G DED1P06634 604 aaKnown RBP3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G SNF5P18480 905 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G PBY1P38254 753 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G UME6P39001 836 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G PES4P39684 611 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G RMD8P43620 662 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G CCM1P48237 864 aaPredicted RBP3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G YGL242CP53066 181 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G IMP4P53941 290 aaKnown RBP3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G UFD2P54860 961 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G NPL3Q01560 414 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
tC(GCA)GtC(GCA)G CRD1Q07560 283 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G RTK1Q12100 620 aaPredicted RBP3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G ARP6Q12509 438 aa3.77□□□□□ -1.81
tC(GCA)GtC(GCA)G ATP1P07251 545 aaKnown RBP3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G GAC1P28006 793 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G EFT1P32324 842 aaKnown RBP3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G SWE1P32944 819 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G MYO3P36006 1272 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G HMT1P38074 348 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G ALO1P54783 526 aaKnown RBP3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G RPT6Q01939 405 aaKnown RBP3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G SMA1Q02651 245 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G YIL046W-AQ3E7Z4 54 aa3.76□□□□□ -1.81
tC(GCA)GtC(GCA)G HAP2P06774 265 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G RPS19AP07280 144 aaKnown RBP3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G RPS19BP07281 144 aaPredicted RBP3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G SES1P07284 462 aaKnown RBP3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G STE4P18851 423 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G GPI10P30777 616 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G ANP1P32629 500 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G PAN5P38787 379 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G CHS7P38843 316 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G EAF5P39995 279 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G CSM2P40465 213 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G ENP2P48234 707 aaKnown RBP3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G PKH3Q03306 898 aaPredicted RBP3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G TAH18Q12181 623 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G REC8Q12188 680 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G SUL2Q12325 893 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G GPR1Q12361 961 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G PNS1Q12412 539 aa3.75□□□□□ -1.81
tC(GCA)GtC(GCA)G TOM70P07213 617 aaKnown RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G RIP1P08067 215 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G DAL5P15365 543 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G RPL8AP17076 256 aaKnown RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G ESS1P22696 170 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G PWP2P25635 923 aaKnown RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G IMP2'P32351 346 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G BIO2P32451 375 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G SRX1P36077 127 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G ISW1P38144 1129 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G SUL1P38359 859 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G PPX1P38698 397 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G WSC4P38739 605 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G SEC16P48415 2195 aaKnown RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G STB4P50104 949 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G TUB4P53378 473 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G UBP10P53874 792 aaPredicted RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G MDM1Q01846 1127 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G RCR2Q03446 210 aaKnown RBP3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G YDL144CQ07589 356 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G YOR389WQ08912 624 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G YPL278CQ08990 100 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G HIF1Q12373 385 aa3.74□□□□□ -1.81
tC(GCA)GtC(GCA)G COX4P04037 155 aa3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G GLN3P18494 730 aa3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G RAD55P38953 406 aa3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G PTI1P39927 425 aaPredicted RBP3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G YAP5P40574 245 aa3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G ASE1P50275 885 aa3.73□□□□□ -1.81
tC(GCA)GtC(GCA)G ZPR1P53303 486 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms