RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	YBR238C	P38330	731 aa	Known RBP	5.35	□□□□□ -1.55
CMR3	YPR013C	LSB3	P43603	459 aa	Known RBP	5.35	□□□□□ -1.55
CMR3	YPR013C	PIP2	P52960	996 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	ELA1	P53861	379 aa	Predicted RBP	5.35	□□□□□ -1.55
CMR3	YPR013C	UBX4	P54730	416 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	RSC3	Q06639	885 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	ACM1	Q08981	209 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	PGI1	P12709	554 aa	Known RBP	5.34	□□□□□ -1.55
CMR3	YPR013C	NPP1	P25353	742 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	PRO1	P32264	428 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	ERT1	P38140	529 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	PCM1	P38628	557 aa	Known RBP	5.34	□□□□□ -1.55
CMR3	YPR013C	OAF1	P39720	1047 aa	Predicted RBP	5.34	□□□□□ -1.55
CMR3	YPR013C	RPN3	P40016	523 aa	Known RBP	5.34	□□□□□ -1.55
CMR3	YPR013C	IES5	P40060	125 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	TED1	P40533	473 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	GZF3	P42944	551 aa	Known RBP	5.34	□□□□□ -1.55
CMR3	YPR013C	NIT3	P49954	291 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	MET14	Q02196	202 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	YDR514C	Q04408	483 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	SYT1	Q06836	1226 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	MET7	Q08645	548 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	PHM7	Q12252	991 aa		5.34	□□□□□ -1.55
CMR3	YPR013C	ERS1	P17261	260 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	HOG1	P32485	435 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	SLA2	P33338	968 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	NNK1	P36003	928 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	MAE1	P36013	669 aa	Known RBP	5.33	□□□□□ -1.56
CMR3	YPR013C	CEM1	P39525	442 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	GPB2	P39717	880 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	TY4A-J	P47023	414 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	PBP1	P53297	722 aa	Known RBP	5.33	□□□□□ -1.56
CMR3	YPR013C	SNP1	Q00916	300 aa	Predicted RBP	5.33	□□□□□ -1.56
CMR3	YPR013C	GIS4	Q04233	774 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	HRQ1	Q05549	1077 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	YLR257W	Q06146	321 aa	Known RBP	5.33	□□□□□ -1.56
CMR3	YPR013C	ATG33	Q06485	197 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	ENV7	Q12003	364 aa		5.33	□□□□□ -1.56
CMR3	YPR013C	TY4B-P	A0A0B7P3V8	1104 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	PTP2	P29461	750 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	HSP78	P33416	811 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	MCD4	P36051	919 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	YKL151C	P36059	337 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	YKR078W	P36158	585 aa	Known RBP	5.32	□□□□□ -1.56
CMR3	YPR013C	ERP2	P39704	215 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	NIT2	P47016	307 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	KIP3	P53086	805 aa	Known RBP	5.32	□□□□□ -1.56
CMR3	YPR013C	HRK1	Q08732	759 aa	Known RBP	5.32	□□□□□ -1.56
CMR3	YPR013C	RRP6	Q12149	733 aa	Known RBP	5.32	□□□□□ -1.56
CMR3	YPR013C	YLL058W	Q12198	575 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	PUS1	Q12211	544 aa	Known RBP	5.32	□□□□□ -1.56
CMR3	YPR013C	TY4A-H	Q6Q5P6	413 aa		5.32	□□□□□ -1.56
CMR3	YPR013C	GAL1	P04385	528 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	NAR1	P23503	491 aa	Known RBP	5.31	□□□□□ -1.56
CMR3	YPR013C	NIC96	P34077	839 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	PTH2	P34222	208 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	UGA2	P38067	497 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	RIM4	P38741	713 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	MNN11	P46985	422 aa	Known RBP	5.31	□□□□□ -1.56
CMR3	YPR013C	GYP7	P48365	746 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	AIM14	P53109	570 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	SPC105	P53148	917 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	DOT1	Q04089	582 aa	Known RBP	5.31	□□□□□ -1.56
CMR3	YPR013C	REH1	Q06709	432 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	GUP2	Q08929	609 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	YOR223W	Q12015	292 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	RMP1	Q12530	201 aa		5.31	□□□□□ -1.56
CMR3	YPR013C	PER1	P25625	357 aa		5.3	□□□□□ -1.56
CMR3	YPR013C	KNS1	P32350	737 aa	Predicted RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	MRS6	P32864	603 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	DID4	P36108	232 aa		5.3	□□□□□ -1.56
CMR3	YPR013C	TSL1	P38427	1098 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	RPN10	P38886	268 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	GPP2	P40106	250 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	HOS3	Q02959	697 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	SVL3	Q03088	825 aa	Known RBP	5.3	□□□□□ -1.56
CMR3	YPR013C	HMG1	P12683	1054 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	PDC5	P16467	563 aa	Known RBP	5.29	□□□□□ -1.56
CMR3	YPR013C	RPA135	P22138	1203 aa	Known RBP	5.29	□□□□□ -1.56
CMR3	YPR013C	SMY2	P32909	740 aa	Known RBP	5.29	□□□□□ -1.56
CMR3	YPR013C	YKL222C	P35995	705 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	YKL133C	P36066	463 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	ALG14	P38242	237 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	DOT6	P40059	670 aa	Known RBP	5.29	□□□□□ -1.56
CMR3	YPR013C	YJL045W	P47052	634 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	CCT8	P47079	568 aa	Known RBP	5.29	□□□□□ -1.56
CMR3	YPR013C	YGR153W	P48238	217 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	TNA1	P53322	534 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	DSE4	P53753	1117 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	NSG2	P53898	299 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	NHX1	Q04121	633 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	COG4	Q06096	861 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	MLC2	Q06580	163 aa		5.29	□□□□□ -1.56
CMR3	YPR013C	MPH2	P0CD99	609 aa		5.28	□□□□□ -1.56
CMR3	YPR013C	ENA1	P13587	1091 aa		5.28	□□□□□ -1.56
CMR3	YPR013C	CDC48	P25694	835 aa	Known RBP	5.28	□□□□□ -1.56
CMR3	YPR013C	PGM2	P37012	569 aa	Known RBP	5.28	□□□□□ -1.56
CMR3	YPR013C	BIT2	P38346	545 aa		5.28	□□□□□ -1.56
CMR3	YPR013C	YER158C	P40095	573 aa		5.28	□□□□□ -1.56
CMR3	YPR013C	CCT5	P40413	562 aa	Known RBP	5.28	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms