RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	NCS6	P53088	359 aa		5.05	□□□□□ -1.6
RSA1	YPL193W	YMR206W	Q03695	313 aa		5.05	□□□□□ -1.6
RSA1	YPL193W	CDC34	P14682	295 aa		5.04	□□□□□ -1.6
RSA1	YPL193W	OYE2	Q03558	400 aa	Known RBP	5.04	□□□□□ -1.6
RSA1	YPL193W	ESC2	Q06340	456 aa		5.04	□□□□□ -1.6
RSA1	YPL193W	YOL073C	Q08232	322 aa		5.04	□□□□□ -1.6
RSA1	YPL193W	SFB2	P53953	876 aa		5.03	□□□□□ -1.6
RSA1	YPL193W	ENB1	Q08299	606 aa		5.03	□□□□□ -1.6
RSA1	YPL193W	FUN30	P31380	1131 aa		5.02	□□□□□ -1.61
RSA1	YPL193W	SPO20	Q04359	397 aa		5.02	□□□□□ -1.61
RSA1	YPL193W	YLL058W	Q12198	575 aa		5.02	□□□□□ -1.61
RSA1	YPL193W	NPP2	P39997	493 aa		5.01	□□□□□ -1.61
RSA1	YPL193W	URM1	P40554	99 aa	Predicted RBP	5.01	□□□□□ -1.61
RSA1	YPL193W	BUL1	P48524	976 aa		5.01	□□□□□ -1.61
RSA1	YPL193W	STB4	P50104	949 aa		5	□□□□□ -1.61
RSA1	YPL193W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RSA1	YPL193W	RMD1	Q03441	430 aa		5	□□□□□ -1.61
RSA1	YPL193W	ATG19	P35193	415 aa		4.99	□□□□□ -1.61
RSA1	YPL193W	TMN2	Q04562	672 aa		4.99	□□□□□ -1.61
RSA1	YPL193W	YPR196W	Q06595	470 aa		4.99	□□□□□ -1.61
RSA1	YPL193W	MCH5	Q08777	521 aa		4.99	□□□□□ -1.61
RSA1	YPL193W	ERG4	P25340	473 aa		4.98	□□□□□ -1.61
RSA1	YPL193W	ABD1	P32783	436 aa	Predicted RBP	4.98	□□□□□ -1.61
RSA1	YPL193W	MET10	P39692	1035 aa		4.98	□□□□□ -1.61
RSA1	YPL193W	KTR4	P38131	464 aa		4.97	□□□□□ -1.61
RSA1	YPL193W	MBP1	P39678	833 aa		4.97	□□□□□ -1.61
RSA1	YPL193W	LGE1	Q02796	332 aa	Known RBP	4.97	□□□□□ -1.61
RSA1	YPL193W	UPC2	Q12151	913 aa		4.97	□□□□□ -1.61
RSA1	YPL193W	HEM3	P28789	327 aa		4.96	□□□□□ -1.62
RSA1	YPL193W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RSA1	YPL193W	STU2	P46675	888 aa		4.96	□□□□□ -1.62
RSA1	YPL193W	GUP2	Q08929	609 aa		4.96	□□□□□ -1.62
RSA1	YPL193W	SED4	P25365	1065 aa		4.95	□□□□□ -1.62
RSA1	YPL193W	SNF7	P39929	240 aa	Known RBP	4.95	□□□□□ -1.62
RSA1	YPL193W	SRP1	Q02821	542 aa	Known RBP	4.95	□□□□□ -1.62
RSA1	YPL193W	MUK1	Q02866	612 aa		4.95	□□□□□ -1.62
RSA1	YPL193W	DUS3	Q06053	668 aa	Known RBP	4.95	□□□□□ -1.62
RSA1	YPL193W	TRM13	Q12383	476 aa		4.95	□□□□□ -1.62
RSA1	YPL193W	ATF1	P40353	525 aa		4.94	□□□□□ -1.62
RSA1	YPL193W	ACF2	Q12168	779 aa		4.94	□□□□□ -1.62
RSA1	YPL193W	TRP4	P07285	380 aa	Predicted RBP	4.93	□□□□□ -1.62
RSA1	YPL193W	CDC12	P32468	407 aa	Known RBP	4.93	□□□□□ -1.62
RSA1	YPL193W	FAA4	P47912	694 aa	Known RBP	4.93	□□□□□ -1.62
RSA1	YPL193W	RNT1	Q02555	471 aa		4.93	□□□□□ -1.62
RSA1	YPL193W	YML020W	Q03722	664 aa		4.93	□□□□□ -1.62
RSA1	YPL193W	OMS1	Q06668	471 aa		4.93	□□□□□ -1.62
RSA1	YPL193W	DNA2	P38859	1522 aa		4.92	□□□□□ -1.62
RSA1	YPL193W	QRI1	P43123	477 aa	Known RBP	4.92	□□□□□ -1.62
RSA1	YPL193W	RAI1	P53063	387 aa	Known RBP	4.92	□□□□□ -1.62
RSA1	YPL193W	GDE1	Q02979	1223 aa		4.92	□□□□□ -1.62
RSA1	YPL193W	ALG7	P07286	448 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	MNR2	P35724	969 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	YER158C	P40095	573 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	YGR053C	P53234	283 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	TIM44	Q01852	431 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	IRC10	Q08118	586 aa		4.91	□□□□□ -1.62
RSA1	YPL193W	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
RSA1	YPL193W	STE14	P32584	239 aa		4.9	□□□□□ -1.63
RSA1	YPL193W	GYP7	P48365	746 aa		4.9	□□□□□ -1.63
RSA1	YPL193W	GND2	P53319	492 aa		4.9	□□□□□ -1.63
RSA1	YPL193W	SLU7	Q02775	382 aa	Known RBP	4.9	□□□□□ -1.63
RSA1	YPL193W	SSL1	Q04673	461 aa	Predicted RBP	4.9	□□□□□ -1.63
RSA1	YPL193W	BDF2	Q07442	638 aa		4.9	□□□□□ -1.63
RSA1	YPL193W	RPC82	P32349	654 aa		4.89	□□□□□ -1.63
RSA1	YPL193W	ASF1	P32447	279 aa		4.89	□□□□□ -1.63
RSA1	YPL193W	MTH1	P35198	433 aa		4.89	□□□□□ -1.63
RSA1	YPL193W	FAL1	Q12099	399 aa	Known RBP	4.89	□□□□□ -1.63
RSA1	YPL193W	PPR1	P07272	904 aa	Predicted RBP	4.88	□□□□□ -1.63
RSA1	YPL193W	SPC42	P36094	363 aa		4.88	□□□□□ -1.63
RSA1	YPL193W	YDR306C	Q06640	478 aa		4.88	□□□□□ -1.63
RSA1	YPL193W	PEX19	Q07418	342 aa		4.88	□□□□□ -1.63
RSA1	YPL193W	PPH3	P32345	308 aa		4.87	□□□□□ -1.63
RSA1	YPL193W	RPD3	P32561	433 aa		4.87	□□□□□ -1.63
RSA1	YPL193W	CUE2	P36075	443 aa	Known RBP	4.87	□□□□□ -1.63
RSA1	YPL193W	TSL1	P38427	1098 aa	Known RBP	4.87	□□□□□ -1.63
RSA1	YPL193W	CDC48	P25694	835 aa	Known RBP	4.86	□□□□□ -1.63
RSA1	YPL193W	NPP1	P25353	742 aa		4.85	□□□□□ -1.63
RSA1	YPL193W	SBA1	P28707	216 aa	Known RBP	4.85	□□□□□ -1.63
RSA1	YPL193W	SEC21	P32074	935 aa	Known RBP	4.85	□□□□□ -1.63
RSA1	YPL193W	PEX2	P32800	271 aa		4.85	□□□□□ -1.63
RSA1	YPL193W	CWC24	P53769	259 aa		4.85	□□□□□ -1.63
RSA1	YPL193W	ERG5	P54781	538 aa		4.85	□□□□□ -1.63
RSA1	YPL193W	VBA5	P36172	582 aa		4.84	□□□□□ -1.63
RSA1	YPL193W	PPS1	P38148	807 aa		4.84	□□□□□ -1.63
RSA1	YPL193W	AGP1	P25376	633 aa		4.83	□□□□□ -1.64
RSA1	YPL193W	STE13	P33894	931 aa		4.83	□□□□□ -1.64
RSA1	YPL193W	YIL108W	P40483	696 aa	Known RBP	4.83	□□□□□ -1.64
RSA1	YPL193W	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
RSA1	YPL193W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RSA1	YPL193W	FRE5	Q08908	694 aa		4.83	□□□□□ -1.64
RSA1	YPL193W	SWR1	Q05471	1514 aa		4.82	□□□□□ -1.64
RSA1	YPL193W	PRI2	P20457	528 aa		4.82	□□□□□ -1.64
RSA1	YPL193W	AAR2	P32357	355 aa	Predicted RBP	4.82	□□□□□ -1.64
RSA1	YPL193W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
RSA1	YPL193W	YRO2	P38079	344 aa		4.82	□□□□□ -1.64
RSA1	YPL193W	VPS30	Q02948	557 aa		4.82	□□□□□ -1.64
RSA1	YPL193W	HBT1	Q07653	1046 aa	Known RBP	4.82	□□□□□ -1.64
RSA1	YPL193W	SNM1	P40993	198 aa		4.81	□□□□□ -1.64
RSA1	YPL193W	NOP8	Q08287	484 aa	Predicted RBP	4.81	□□□□□ -1.64
RSA1	YPL193W	SWM1	Q12379	170 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms