RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W SRT1Q03175 343 aa6.47□□□□□ -1.37
YDC1YPL087W SGD1Q06132 899 aa6.47□□□□□ -1.37
YDC1YPL087W YDL124WQ07551 312 aaKnown RBP6.47□□□□□ -1.37
YDC1YPL087W CYC1P00044 109 aaPredicted RBP6.46□□□□□ -1.38
YDC1YPL087W CIT1P00890 479 aa6.46□□□□□ -1.38
YDC1YPL087W CCM1P48237 864 aaPredicted RBP6.46□□□□□ -1.38
YDC1YPL087W HUL5P53119 910 aa6.46□□□□□ -1.38
YDC1YPL087W MSC2Q03455 724 aa6.46□□□□□ -1.38
YDC1YPL087W FPR4Q06205 392 aaPredicted RBP6.46□□□□□ -1.38
YDC1YPL087W FLC1Q08967 793 aa6.46□□□□□ -1.38
YDC1YPL087W ESP1Q03018 1630 aa6.46□□□□□ -1.38
YDC1YPL087W PAN1P32521 1480 aa6.46□□□□□ -1.38
YDC1YPL087W YTA7P40340 1379 aa6.45□□□□□ -1.38
YDC1YPL087W CMP2P14747 604 aa6.45□□□□□ -1.38
YDC1YPL087W GAL11P19659 1081 aa6.45□□□□□ -1.38
YDC1YPL087W YKL091CP33324 310 aaKnown RBP6.45□□□□□ -1.38
YDC1YPL087W YRO2P38079 344 aa6.45□□□□□ -1.38
YDC1YPL087W CHZ1P40019 153 aaPredicted RBP6.45□□□□□ -1.38
YDC1YPL087W AVT1P47082 602 aa6.45□□□□□ -1.38
YDC1YPL087W GYP7P48365 746 aa6.45□□□□□ -1.38
YDC1YPL087W HFM1P51979 1187 aa6.45□□□□□ -1.38
YDC1YPL087W LCD1Q04377 747 aa6.45□□□□□ -1.38
YDC1YPL087W IRC20Q06554 1556 aa6.44□□□□□ -1.38
YDC1YPL087W GAS1P22146 559 aaKnown RBP6.44□□□□□ -1.38
YDC1YPL087W ELM1P32801 640 aa6.44□□□□□ -1.38
YDC1YPL087W SEG2P34250 1132 aa6.44□□□□□ -1.38
YDC1YPL087W YKL151CP36059 337 aa6.44□□□□□ -1.38
YDC1YPL087W MTC3P53077 123 aa6.44□□□□□ -1.38
YDC1YPL087W YPR196WQ06595 470 aa6.44□□□□□ -1.38
YDC1YPL087W YDL177CQ12257 170 aa6.44□□□□□ -1.38
YDC1YPL087W CDC48P25694 835 aaKnown RBP6.43□□□□□ -1.38
YDC1YPL087W ABZ1P37254 787 aaPredicted RBP6.43□□□□□ -1.38
YDC1YPL087W YAP1801P38856 637 aa6.43□□□□□ -1.38
YDC1YPL087W YER158CP40095 573 aa6.43□□□□□ -1.38
YDC1YPL087W IOC3P43596 787 aa6.43□□□□□ -1.38
YDC1YPL087W PSP2P50109 593 aaKnown RBP6.43□□□□□ -1.38
YDC1YPL087W UBX5Q06682 500 aa6.43□□□□□ -1.38
YDC1YPL087W YPK9Q12697 1472 aa6.42□□□□□ -1.38
YDC1YPL087W HBS1P32769 611 aaKnown RBP6.42□□□□□ -1.38
YDC1YPL087W GIC1P38785 314 aa6.42□□□□□ -1.38
YDC1YPL087W RPN4Q03465 531 aa6.42□□□□□ -1.38
YDC1YPL087W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
YDC1YPL087W DOM34P33309 386 aa6.41□□□□□ -1.38
YDC1YPL087W ECM21P38167 1117 aaKnown RBP6.41□□□□□ -1.38
YDC1YPL087W YHR020WP38708 688 aaKnown RBP6.41□□□□□ -1.38
YDC1YPL087W LAM1P38851 1228 aa6.41□□□□□ -1.38
YDC1YPL087W DRS2P39524 1355 aa6.41□□□□□ -1.38
YDC1YPL087W TY1B-BRQ12193 1756 aa6.41□□□□□ -1.38
YDC1YPL087W TY1B-GR3Q12316 1755 aa6.41□□□□□ -1.38
YDC1YPL087W TY1B-ORQ92393 1755 aa6.41□□□□□ -1.38
YDC1YPL087W GAL10P04397 699 aa6.4□□□□□ -1.38
YDC1YPL087W HSF1P10961 833 aa6.4□□□□□ -1.38
YDC1YPL087W ENA1P13587 1091 aa6.4□□□□□ -1.38
YDC1YPL087W REC104P33323 182 aa6.4□□□□□ -1.38
YDC1YPL087W RSP5P39940 809 aaKnown RBP6.4□□□□□ -1.38
YDC1YPL087W ZRG8P40021 1076 aa6.4□□□□□ -1.38
YDC1YPL087W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
YDC1YPL087W ENA2Q01896 1091 aa6.4□□□□□ -1.38
YDC1YPL087W VPS30Q02948 557 aa6.4□□□□□ -1.38
YDC1YPL087W RIB2Q12362 591 aaKnown RBP6.4□□□□□ -1.38
YDC1YPL087W ENA5Q12691 1091 aa6.4□□□□□ -1.38
YDC1YPL087W SOD2P00447 233 aa6.39□□□□□ -1.39
YDC1YPL087W ATG19P35193 415 aa6.39□□□□□ -1.39
YDC1YPL087W PET10P36139 283 aa6.39□□□□□ -1.39
YDC1YPL087W MEF2P39677 819 aa6.39□□□□□ -1.39
YDC1YPL087W RIM8P53179 542 aa6.39□□□□□ -1.39
YDC1YPL087W YGR012WP53206 393 aa6.39□□□□□ -1.39
YDC1YPL087W TAF8Q03750 510 aa6.39□□□□□ -1.39
YDC1YPL087W RXT3Q07458 294 aa6.39□□□□□ -1.39
YDC1YPL087W HBN1Q96VH4 193 aa6.39□□□□□ -1.39
YDC1YPL087W CAN1P04817 590 aa6.38□□□□□ -1.39
YDC1YPL087W RPS13P05756 151 aaKnown RBP6.38□□□□□ -1.39
YDC1YPL087W TSA1P34760 196 aaKnown RBP6.38□□□□□ -1.39
YDC1YPL087W YBR238CP38330 731 aaKnown RBP6.38□□□□□ -1.39
YDC1YPL087W TSL1P38427 1098 aaKnown RBP6.38□□□□□ -1.39
YDC1YPL087W IRC24P40580 263 aa6.38□□□□□ -1.39
YDC1YPL087W NIT3P49954 291 aa6.38□□□□□ -1.39
YDC1YPL087W ROT1Q03691 256 aa6.38□□□□□ -1.39
YDC1YPL087W CDA2Q06703 312 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-LR1P0C2J3 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-FP0CX63 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-GR2P0CX64 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-CP25384 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-DR2Q03494 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY1B-DR1Q03855 1755 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-DR3Q07791 1770 aaKnown RBP6.38□□□□□ -1.39
YDC1YPL087W TY2B-OR1Q12113 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-DR1Q12472 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TY2B-OR2Q12501 1770 aa6.38□□□□□ -1.39
YDC1YPL087W TOM70P07213 617 aaKnown RBP6.37□□□□□ -1.39
YDC1YPL087W YBR284WP38150 797 aa6.37□□□□□ -1.39
YDC1YPL087W POA1P38218 177 aa6.37□□□□□ -1.39
YDC1YPL087W MND2P40577 368 aa6.37□□□□□ -1.39
YDC1YPL087W GCN5Q03330 439 aa6.37□□□□□ -1.39
YDC1YPL087W YPR071WQ12346 211 aa6.37□□□□□ -1.39
YDC1YPL087W PRP6P19735 899 aaPredicted RBP6.36□□□□□ -1.39
YDC1YPL087W AIM3P38266 947 aaKnown RBP6.36□□□□□ -1.39
YDC1YPL087W UBP6P43593 499 aaKnown RBP6.36□□□□□ -1.39
YDC1YPL087W XYL2Q07993 356 aa6.36□□□□□ -1.39
YDC1YPL087W GPB1Q08886 897 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms