RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W NTG2Q08214 380 aa3.23□□□□□ -1.89
BRO1YPL084W OSW2Q12202 724 aa3.23□□□□□ -1.89
BRO1YPL084W GLT1Q12680 2145 aaKnown RBP3.23□□□□□ -1.89
BRO1YPL084W RAD53P22216 821 aa3.23□□□□□ -1.89
BRO1YPL084W APL1P27351 700 aa3.23□□□□□ -1.89
BRO1YPL084W YKR073CP36153 106 aa3.23□□□□□ -1.89
BRO1YPL084W ABZ1P37254 787 aaPredicted RBP3.23□□□□□ -1.89
BRO1YPL084W YER158CP40095 573 aa3.23□□□□□ -1.89
BRO1YPL084W DNM1P54861 757 aa3.23□□□□□ -1.89
BRO1YPL084W UTP14Q04500 899 aaKnown RBP3.23□□□□□ -1.89
BRO1YPL084W YGR161W-CQ3E744 92 aa3.23□□□□□ -1.89
BRO1YPL084W CDC48P25694 835 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W FUN30P31380 1131 aa3.22□□□□□ -1.89
BRO1YPL084W PEX6P33760 1030 aa3.22□□□□□ -1.89
BRO1YPL084W YKR078WP36158 585 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W TOS1P38288 455 aa3.22□□□□□ -1.89
BRO1YPL084W YJR142WP47173 342 aa3.22□□□□□ -1.89
BRO1YPL084W FOL2P51601 243 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W UGO1Q03327 502 aa3.22□□□□□ -1.89
BRO1YPL084W XYL2Q07993 356 aa3.22□□□□□ -1.89
BRO1YPL084W NOP14Q99207 810 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W DSS1P39112 969 aa3.22□□□□□ -1.89
BRO1YPL084W ALO1P54783 526 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W LPX1Q12405 387 aaKnown RBP3.22□□□□□ -1.89
BRO1YPL084W YAP1801P38856 637 aa3.21□□□□□ -1.9
BRO1YPL084W GYP8P43570 497 aa3.21□□□□□ -1.9
BRO1YPL084W RSM24Q03976 319 aa3.21□□□□□ -1.9
BRO1YPL084W MDM12Q92328 271 aa3.21□□□□□ -1.9
BRO1YPL084W KIN2P13186 1147 aaKnown RBP3.21□□□□□ -1.9
BRO1YPL084W MEF1P25039 761 aa3.21□□□□□ -1.9
BRO1YPL084W SFP1P32432 683 aa3.21□□□□□ -1.9
BRO1YPL084W HSP78P33416 811 aa3.21□□□□□ -1.9
BRO1YPL084W SPC29P33419 253 aa3.21□□□□□ -1.9
BRO1YPL084W ECM21P38167 1117 aaKnown RBP3.21□□□□□ -1.9
BRO1YPL084W ADR1P07248 1323 aa3.2□□□□□ -1.9
BRO1YPL084W RPL8AP17076 256 aaKnown RBP3.2□□□□□ -1.9
BRO1YPL084W SRM1P21827 482 aa3.2□□□□□ -1.9
BRO1YPL084W VBA3P25594 458 aa3.2□□□□□ -1.9
BRO1YPL084W NIT3P49954 291 aa3.2□□□□□ -1.9
BRO1YPL084W YKE2P52553 114 aa3.2□□□□□ -1.9
BRO1YPL084W YGR283CP53336 341 aaPredicted RBP3.2□□□□□ -1.9
BRO1YPL084W TFB2Q02939 513 aa3.2□□□□□ -1.9
BRO1YPL084W ENV7Q12003 364 aa3.2□□□□□ -1.9
BRO1YPL084W RIB2Q12362 591 aaKnown RBP3.2□□□□□ -1.9
BRO1YPL084W LIP5P32875 414 aa3.2□□□□□ -1.9
BRO1YPL084W DAM1P53267 343 aa3.2□□□□□ -1.9
BRO1YPL084W BRE4Q07660 1125 aa3.2□□□□□ -1.9
BRO1YPL084W RFA1P22336 621 aaKnown RBP3.19□□□□□ -1.9
BRO1YPL084W GSY1P23337 708 aa3.19□□□□□ -1.9
BRO1YPL084W PUB1P32588 453 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9 RIP-Chip
BRO1YPL084W ETP1P38748 585 aaKnown RBP3.19□□□□□ -1.9
BRO1YPL084W ORC3P54790 616 aa3.19□□□□□ -1.9
BRO1YPL084W MSC2Q03455 724 aa3.19□□□□□ -1.9
BRO1YPL084W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
BRO1YPL084W CYC1P00044 109 aaPredicted RBP3.19□□□□□ -1.9
BRO1YPL084W CDC9P04819 755 aa3.19□□□□□ -1.9
BRO1YPL084W NOT3P06102 836 aaKnown RBP3.19□□□□□ -1.9
BRO1YPL084W CMP2P14747 604 aa3.19□□□□□ -1.9
BRO1YPL084W EMC3P36039 253 aa3.19□□□□□ -1.9
BRO1YPL084W OMA1P36163 345 aa3.19□□□□□ -1.9
BRO1YPL084W YBR238CP38330 731 aaKnown RBP3.19□□□□□ -1.9
BRO1YPL084W CEP3P40969 608 aa3.19□□□□□ -1.9
BRO1YPL084W CTH1P47976 325 aa3.19□□□□□ -1.9
BRO1YPL084W YDR514CQ04408 483 aa3.19□□□□□ -1.9
BRO1YPL084W MPH2P0CD99 609 aa3.18□□□□□ -1.9
BRO1YPL084W ENA1P13587 1091 aa3.18□□□□□ -1.9
BRO1YPL084W TSR4P25040 408 aa3.18□□□□□ -1.9
BRO1YPL084W RPC82P32349 654 aa3.18□□□□□ -1.9
BRO1YPL084W SRP101P32916 621 aa3.18□□□□□ -1.9
BRO1YPL084W YNL193WP53870 558 aa3.18□□□□□ -1.9
BRO1YPL084W ENA2Q01896 1091 aa3.18□□□□□ -1.9
BRO1YPL084W RSC3Q06639 885 aa3.18□□□□□ -1.9
BRO1YPL084W MET7Q08645 548 aa3.18□□□□□ -1.9
BRO1YPL084W ENA5Q12691 1091 aa3.18□□□□□ -1.9
BRO1YPL084W PER1P25625 357 aa3.18□□□□□ -1.9
BRO1YPL084W CRP1P38845 465 aaKnown RBP3.18□□□□□ -1.9
BRO1YPL084W ZRG8P40021 1076 aa3.18□□□□□ -1.9
BRO1YPL084W TY4A-JP47023 414 aa3.18□□□□□ -1.9
BRO1YPL084W YGR012WP53206 393 aa3.18□□□□□ -1.9
BRO1YPL084W ENV11P53246 860 aa3.18□□□□□ -1.9
BRO1YPL084W ATP25Q03153 612 aa3.18□□□□□ -1.9
BRO1YPL084W SIZ1Q04195 904 aa3.18□□□□□ -1.9
BRO1YPL084W DAL7P21826 554 aa3.17□□□□□ -1.9
BRO1YPL084W MTC2P34246 357 aa3.17□□□□□ -1.9
BRO1YPL084W HLJ1P48353 224 aa3.17□□□□□ -1.9
BRO1YPL084W ZDS1P50111 915 aaKnown RBP3.17□□□□□ -1.9
BRO1YPL084W YNR029CP53729 429 aaKnown RBP3.17□□□□□ -1.9
BRO1YPL084W GAL10P04397 699 aa3.17□□□□□ -1.9
BRO1YPL084W SRD1P09007 221 aa3.17□□□□□ -1.9
BRO1YPL084W INP52P50942 1183 aa3.17□□□□□ -1.9
BRO1YPL084W RAI1P53063 387 aaKnown RBP3.17□□□□□ -1.9
BRO1YPL084W TAD1P53065 400 aa3.17□□□□□ -1.9
BRO1YPL084W RAD18P10862 487 aa3.16□□□□□ -1.9
BRO1YPL084W URA1P28272 314 aaPredicted RBP3.16□□□□□ -1.9
BRO1YPL084W RPD3P32561 433 aa3.16□□□□□ -1.9
BRO1YPL084W STE13P33894 931 aa3.16□□□□□ -1.9
BRO1YPL084W NOG2P53742 486 aaKnown RBP3.16□□□□□ -1.9
BRO1YPL084W VPS30Q02948 557 aa3.16□□□□□ -1.9
BRO1YPL084W ROT1Q03691 256 aa3.16□□□□□ -1.9
BRO1YPL084W LRS4Q04087 347 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms