RNA–Protein interactions for RNA: YPL079W

RPL21B, Transcript of Ribosomal 60S subunit protein L21B, yeast

Gene RPL21B, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL21B	YPL079W	KIC1	P38692	1080 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	SMF1	P38925	575 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	YMR124W	P39523	943 aa	Known RBP	5.62	□□□□□ -1.51
RPL21B	YPL079W	PTA1	Q01329	785 aa	Predicted RBP	5.62	□□□□□ -1.51
RPL21B	YPL079W	DIG1	Q03063	452 aa	Known RBP	5.62	□□□□□ -1.51
RPL21B	YPL079W	NGL3	Q03210	505 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	VPS60	Q03390	229 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	VAC14	Q06708	880 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	YDR461C-A	Q2V2P7	80 aa		5.62	□□□□□ -1.51
RPL21B	YPL079W	PGK1	P00560	416 aa	Known RBP	5.61	□□□□□ -1.51
RPL21B	YPL079W	ERG11	P10614	530 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	APL1	P27351	700 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	LTV1	P34078	463 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	MCR1	P36060	302 aa	Known RBP	5.61	□□□□□ -1.51
RPL21B	YPL079W	TCD1	P38756	429 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	RPN3	P40016	523 aa	Known RBP	5.61	□□□□□ -1.51
RPL21B	YPL079W	NDC80	P40460	691 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	YAP5	P40574	245 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	AVT1	P47082	602 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
RPL21B	YPL079W	SUB2	Q07478	446 aa	Known RBP	5.61	□□□□□ -1.51
RPL21B	YPL079W	CRD1	Q07560	283 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	GUD1	Q07729	489 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	ERP3	Q12403	225 aa		5.61	□□□□□ -1.51
RPL21B	YPL079W	DPB3	P27344	201 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	MRF1	P30775	413 aa	Predicted RBP	5.6	□□□□□ -1.51
RPL21B	YPL079W	NIP100	P33420	868 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	OCT1	P35999	772 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	MCD4	P36051	919 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	JNM1	P36224	373 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	PEA2	P40091	420 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	SCS3	P53012	380 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	TAM41	P53230	385 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	NCS2	P53923	493 aa	Predicted RBP	5.6	□□□□□ -1.51
RPL21B	YPL079W	UTP5	Q04177	643 aa	Known RBP	5.6	□□□□□ -1.51
RPL21B	YPL079W	RBA50	Q04418	439 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	UTP14	Q04500	899 aa	Known RBP	5.6	□□□□□ -1.51
RPL21B	YPL079W	YDR278C	Q05612	105 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	PHM6	Q05637	104 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	DUS4	Q06063	367 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	MLH2	Q07980	695 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	MED1	Q12321	566 aa		5.6	□□□□□ -1.51
RPL21B	YPL079W	TRP2	P00899	507 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	SSA1	P10591	642 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	PCK1	P10963	549 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	PHO8	P11491	566 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	GFA1	P14742	717 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	CDC48	P25694	835 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	CLB5	P30283	435 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	HXT1	P32465	570 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	IXR1	P33417	597 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	KTR2	P33550	425 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	REG2	P38232	338 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	BUD16	P39988	312 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	CNM67	P53865	581 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	SEC5	P89102	971 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	CWC15	Q03772	175 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	CSR1	Q06705	408 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	SLX4	Q12098	748 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	YKL068W-A	Q3E826	78 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	NOP14	Q99207	810 aa	Known RBP	5.59	□□□□□ -1.51
RPL21B	YPL079W	ECM29	P38737	1868 aa		5.59	□□□□□ -1.51
RPL21B	YPL079W	DED1	P06634	604 aa	Known RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	SPT2	P06843	333 aa	Predicted RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	RPO26	P20435	155 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	PER1	P25625	357 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	NAM7	P30771	971 aa	Known RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	YSC83	P32792	385 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	SAP1	P39955	897 aa	Known RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	UBP15	P50101	1230 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	TIM8	P57744	87 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	SLD5	Q03406	294 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	YMR114C	Q04471	368 aa	Known RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	YMR321C	Q04898	105 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	YLR297W	Q05899	129 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	ATG23	Q06671	453 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	YPR078C	Q06813	372 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	ISA1	Q07821	250 aa	Predicted RBP	5.58	□□□□□ -1.52
RPL21B	YPL079W	PLP2	Q12017	286 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	RMP1	Q12530	201 aa		5.58	□□□□□ -1.52
RPL21B	YPL079W	TCP1	P12612	559 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	CHS2	P14180	963 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	VMA2	P16140	517 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	DBP5	P20449	482 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	CKI1	P20485	582 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	TKL1	P23254	680 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	DBP7	P36120	742 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	TRZ1	P36159	838 aa	Predicted RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	PTC4	P38089	393 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	SMC2	P38989	1170 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	CCT4	P39078	528 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	CIN4	P39110	191 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	YIL089W	P40500	205 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	FIG4	P42837	879 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	SAD1	P43589	448 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	ZPR1	P53303	486 aa	Known RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	MAL13	P53338	473 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	ROD1	Q02805	837 aa		5.57	□□□□□ -1.52
RPL21B	YPL079W	GIR2	Q03768	265 aa	Predicted RBP	5.57	□□□□□ -1.52
RPL21B	YPL079W	URH1	Q04179	340 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms