RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SGF11YPL047W BDF2Q07442 638 aa2.51□□□□□ -2.01
SGF11YPL047W ACF2Q12168 779 aa2.51□□□□□ -2.01
SGF11YPL047W LAS17Q12446 633 aa2.51□□□□□ -2.01
SGF11YPL047W ATE1P16639 503 aa2.5□□□□□ -2.01
SGF11YPL047W ERG4P25340 473 aa2.5□□□□□ -2.01
SGF11YPL047W SAH1P39954 449 aaKnown RBP2.5□□□□□ -2.01
SGF11YPL047W QRI1P43123 477 aaKnown RBP2.5□□□□□ -2.01
SGF11YPL047W STB4P50104 949 aa2.5□□□□□ -2.01
SGF11YPL047W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01 RIP-Chip
SGF11YPL047W SPO20Q04359 397 aa2.5□□□□□ -2.01
SGF11YPL047W TMN2Q04562 672 aa2.5□□□□□ -2.01
SGF11YPL047W HRQ1Q05549 1077 aa2.5□□□□□ -2.01
SGF11YPL047W OMS1Q06668 471 aa2.5□□□□□ -2.01
SGF11YPL047W WHI4Q07655 649 aaKnown RBP2.5□□□□□ -2.01
SGF11YPL047W YPL066WQ12194 479 aa2.5□□□□□ -2.01
SGF11YPL047W YKL151CP36059 337 aa2.49□□□□□ -2.01
SGF11YPL047W CUE2P36075 443 aaKnown RBP2.49□□□□□ -2.01
SGF11YPL047W GIC1P38785 314 aa2.49□□□□□ -2.01
SGF11YPL047W SNM1P40993 198 aa2.49□□□□□ -2.01
SGF11YPL047W RNT1Q02555 471 aa2.49□□□□□ -2.01
SGF11YPL047W RMD1Q03441 430 aa2.49□□□□□ -2.01
SGF11YPL047W TRP4P07285 380 aaPredicted RBP2.48□□□□□ -2.01
SGF11YPL047W CDC34P14682 295 aa2.48□□□□□ -2.01
SGF11YPL047W SED4P25365 1065 aa2.48□□□□□ -2.01
SGF11YPL047W RPC82P32349 654 aa2.48□□□□□ -2.01
SGF11YPL047W PET112P33893 541 aa2.48□□□□□ -2.01
SGF11YPL047W PIN4P34217 668 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SGF11YPL047W BUL1P48524 976 aa2.48□□□□□ -2.01
SGF11YPL047W SRP1Q02821 542 aaKnown RBP2.48□□□□□ -2.01
SGF11YPL047W EEB1Q02891 456 aa2.48□□□□□ -2.01
SGF11YPL047W YLR225CQ05948 407 aaKnown RBP2.48□□□□□ -2.01
SGF11YPL047W YPR196WQ06595 470 aa2.48□□□□□ -2.01
SGF11YPL047W IRC10Q08118 586 aa2.48□□□□□ -2.01
SGF11YPL047W DUT1P33317 147 aa2.47□□□□□ -2.01
SGF11YPL047W UPC2Q12151 913 aa2.47□□□□□ -2.01
SGF11YPL047W PPR1P07272 904 aaPredicted RBP2.46□□□□□ -2.02
SGF11YPL047W ALG7P07286 448 aa2.46□□□□□ -2.02
SGF11YPL047W MTH1P35198 433 aa2.46□□□□□ -2.02
SGF11YPL047W SPC42P36094 363 aa2.46□□□□□ -2.02
SGF11YPL047W KRI1P42846 591 aaKnown RBP2.46□□□□□ -2.02
SGF11YPL047W SFB2P53953 876 aa2.46□□□□□ -2.02
SGF11YPL047W MET10P39692 1035 aa2.45□□□□□ -2.02
SGF11YPL047W RAI1P53063 387 aaKnown RBP2.45□□□□□ -2.02
SGF11YPL047W GND2P53319 492 aa2.45□□□□□ -2.02
SGF11YPL047W MUK1Q02866 612 aa2.45□□□□□ -2.02
SGF11YPL047W RRP15Q06511 250 aaPredicted RBP2.45□□□□□ -2.02
SGF11YPL047W HBT1Q07653 1046 aaKnown RBP2.45□□□□□ -2.02
SGF11YPL047W HEM3P28789 327 aa2.44□□□□□ -2.02
SGF11YPL047W CDC12P32468 407 aaKnown RBP2.44□□□□□ -2.02
SGF11YPL047W MNR2P35724 969 aa2.44□□□□□ -2.02
SGF11YPL047W NPP2P39997 493 aa2.44□□□□□ -2.02
SGF11YPL047W YER158CP40095 573 aa2.44□□□□□ -2.02
SGF11YPL047W GYP7P48365 746 aa2.44□□□□□ -2.02
SGF11YPL047W VPS30Q02948 557 aa2.44□□□□□ -2.02
SGF11YPL047W OYE2Q03558 400 aaKnown RBP2.44□□□□□ -2.02
SGF11YPL047W DUS3Q06053 668 aaKnown RBP2.44□□□□□ -2.02
SGF11YPL047W PEX19Q07418 342 aa2.44□□□□□ -2.02
SGF11YPL047W NOT3P06102 836 aaKnown RBP2.43□□□□□ -2.02
SGF11YPL047W ASF1P32447 279 aa2.43□□□□□ -2.02
SGF11YPL047W STE14P32584 239 aa2.43□□□□□ -2.02
SGF11YPL047W ESC2Q06340 456 aa2.43□□□□□ -2.02
SGF11YPL047W MET3P08536 511 aa2.42□□□□□ -2.02
SGF11YPL047W CDC48P25694 835 aaKnown RBP2.42□□□□□ -2.02
SGF11YPL047W ABD1P32783 436 aaPredicted RBP2.42□□□□□ -2.02
SGF11YPL047W PEX2P32800 271 aa2.42□□□□□ -2.02
SGF11YPL047W YKR078WP36158 585 aaKnown RBP2.42□□□□□ -2.02
SGF11YPL047W MBP1P39678 833 aa2.42□□□□□ -2.02
SGF11YPL047W DAS1P47005 663 aa2.42□□□□□ -2.02
SGF11YPL047W YGR053CP53234 283 aa2.42□□□□□ -2.02
SGF11YPL047W DLT1Q04216 342 aa2.42□□□□□ -2.02
SGF11YPL047W FRE5Q08908 694 aa2.42□□□□□ -2.02
SGF11YPL047W NDJ1Q12366 352 aa2.42□□□□□ -2.02
SGF11YPL047W TRM13Q12383 476 aa2.42□□□□□ -2.02
SGF11YPL047W PPH3P32345 308 aa2.41□□□□□ -2.02
SGF11YPL047W PPS1P38148 807 aa2.41□□□□□ -2.02
SGF11YPL047W YHL017WP38745 532 aa2.41□□□□□ -2.02
SGF11YPL047W SDS3P40505 327 aa2.41□□□□□ -2.02
SGF11YPL047W ERG5P54781 538 aa2.41□□□□□ -2.02
SGF11YPL047W SLU7Q02775 382 aaKnown RBP2.41□□□□□ -2.02
SGF11YPL047W GDE1Q02979 1223 aa2.41□□□□□ -2.02
SGF11YPL047W SSL1Q04673 461 aaPredicted RBP2.41□□□□□ -2.02
SGF11YPL047W MRH1Q12117 320 aaPredicted RBP2.41□□□□□ -2.02
SGF11YPL047W SWM1Q12379 170 aa2.41□□□□□ -2.02
SGF11YPL047W ADE8P04161 214 aa2.4□□□□□ -2.03
SGF11YPL047W SBA1P28707 216 aaKnown RBP2.4□□□□□ -2.03
SGF11YPL047W SEC21P32074 935 aaKnown RBP2.4□□□□□ -2.03
SGF11YPL047W STE13P33894 931 aa2.4□□□□□ -2.03
SGF11YPL047W CTF13P35203 478 aa2.4□□□□□ -2.03
SGF11YPL047W TSL1P38427 1098 aaKnown RBP2.4□□□□□ -2.03
SGF11YPL047W ELO3P40319 345 aa2.4□□□□□ -2.03
SGF11YPL047W FAA4P47912 694 aaKnown RBP2.4□□□□□ -2.03
SGF11YPL047W YDR306CQ06640 478 aa2.4□□□□□ -2.03
SGF11YPL047W FAL1Q12099 399 aaKnown RBP2.4□□□□□ -2.03
SGF11YPL047W TRM11Q12463 433 aa2.4□□□□□ -2.03
SGF11YPL047W CAF20P12962 161 aaKnown RBP2.39□□□□□ -2.03
SGF11YPL047W GFA1P14742 717 aaKnown RBP2.39□□□□□ -2.03
SGF11YPL047W RFA1P22336 621 aaKnown RBP2.39□□□□□ -2.03
SGF11YPL047W AGP1P25376 633 aa2.39□□□□□ -2.03
SGF11YPL047W PPZ2P33329 710 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms