RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W AIM14P53109 570 aa2.79□□□□□ -1.96
VPS16YPL045W SOK2P53438 785 aaPredicted RBP2.79□□□□□ -1.96
VPS16YPL045W MDG1P53885 366 aa2.79□□□□□ -1.96
VPS16YPL045W TY1A-DR2Q03964 440 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W ATG33Q06485 197 aa2.79□□□□□ -1.96
VPS16YPL045W RPN12P32496 274 aa2.78□□□□□ -1.96
VPS16YPL045W VPS27P40343 622 aaKnown RBP2.78□□□□□ -1.96
VPS16YPL045W CCM1P48237 864 aaPredicted RBP2.78□□□□□ -1.96
VPS16YPL045W YGR045CP53229 120 aa2.78□□□□□ -1.96
VPS16YPL045W DAM1P53267 343 aa2.78□□□□□ -1.96
VPS16YPL045W COG8Q04632 607 aa2.78□□□□□ -1.96
VPS16YPL045W MET7Q08645 548 aa2.78□□□□□ -1.96
VPS16YPL045W SPO21Q12411 609 aa2.78□□□□□ -1.96
VPS16YPL045W APA1P16550 321 aaKnown RBP2.78□□□□□ -1.97
VPS16YPL045W MRS6P32864 603 aaKnown RBP2.78□□□□□ -1.97
VPS16YPL045W EXO84P38261 753 aa2.78□□□□□ -1.97
VPS16YPL045W YHL041WP38730 149 aa2.78□□□□□ -1.97
VPS16YPL045W GIP2P40036 548 aa2.78□□□□□ -1.97
VPS16YPL045W MNN11P46985 422 aaKnown RBP2.78□□□□□ -1.97
VPS16YPL045W SNP1Q00916 300 aaPredicted RBP2.78□□□□□ -1.97
VPS16YPL045W YDR338CQ05497 695 aa2.78□□□□□ -1.97
VPS16YPL045W HRQ1Q05549 1077 aa2.78□□□□□ -1.97
VPS16YPL045W RSA3Q05942 220 aaKnown RBP2.78□□□□□ -1.97
VPS16YPL045W OPT2Q06593 877 aa2.78□□□□□ -1.97
VPS16YPL045W AVO1Q08236 1176 aa2.78□□□□□ -1.97
VPS16YPL045W ENV7Q12003 364 aa2.78□□□□□ -1.97
VPS16YPL045W RMP1Q12530 201 aa2.78□□□□□ -1.97
VPS16YPL045W HMG1P12683 1054 aa2.77□□□□□ -1.97
VPS16YPL045W ERS1P17261 260 aa2.77□□□□□ -1.97
VPS16YPL045W KCC4P25389 1037 aa2.77□□□□□ -1.97
VPS16YPL045W PER1P25625 357 aa2.77□□□□□ -1.97
VPS16YPL045W SLA2P33338 968 aa2.77□□□□□ -1.97
VPS16YPL045W EMC3P36039 253 aa2.77□□□□□ -1.97
VPS16YPL045W YKL133CP36066 463 aa2.77□□□□□ -1.97
VPS16YPL045W RIM4P38741 713 aa2.77□□□□□ -1.97
VPS16YPL045W HSE1P38753 452 aa2.77□□□□□ -1.97
VPS16YPL045W GPB2P39717 880 aa2.77□□□□□ -1.97
VPS16YPL045W ELA1P53861 379 aaPredicted RBP2.77□□□□□ -1.97
VPS16YPL045W CUZ1P53899 274 aa2.77□□□□□ -1.97
VPS16YPL045W PHM6Q05637 104 aa2.77□□□□□ -1.97
VPS16YPL045W ENT2Q05785 613 aa2.77□□□□□ -1.97
VPS16YPL045W MLC2Q06580 163 aa2.77□□□□□ -1.97
VPS16YPL045W GUP2Q08929 609 aa2.77□□□□□ -1.97
VPS16YPL045W ACM1Q08981 209 aa2.77□□□□□ -1.97
VPS16YPL045W TY1A-BLQ12266 440 aa2.77□□□□□ -1.97
VPS16YPL045W MPH2P0CD99 609 aa2.76□□□□□ -1.97
VPS16YPL045W PRO1P32264 428 aa2.76□□□□□ -1.97
VPS16YPL045W HEM12P32347 362 aaPredicted RBP2.76□□□□□ -1.97
VPS16YPL045W PTH2P34222 208 aa2.76□□□□□ -1.97
VPS16YPL045W BIT2P38346 545 aa2.76□□□□□ -1.97
VPS16YPL045W TSL1P38427 1098 aaKnown RBP2.76□□□□□ -1.97
VPS16YPL045W CCT5P40413 562 aaKnown RBP2.76□□□□□ -1.97
VPS16YPL045W HIS6P40545 261 aa2.76□□□□□ -1.97
VPS16YPL045W ADE12P80210 433 aaKnown RBP2.76□□□□□ -1.97
VPS16YPL045W ECM9Q02202 377 aa2.76□□□□□ -1.97
VPS16YPL045W YMR265CQ03508 461 aaKnown RBP2.76□□□□□ -1.97
VPS16YPL045W YDR514CQ04408 483 aa2.76□□□□□ -1.97
VPS16YPL045W MIH1P23748 554 aa2.76□□□□□ -1.97
VPS16YPL045W DBF20P32328 564 aa2.76□□□□□ -1.97
VPS16YPL045W DID4P36108 232 aa2.76□□□□□ -1.97
VPS16YPL045W UGA2P38067 497 aa2.76□□□□□ -1.97
VPS16YPL045W KTR4P38131 464 aa2.76□□□□□ -1.97
VPS16YPL045W TED1P40533 473 aa2.76□□□□□ -1.97
VPS16YPL045W YFL054CP43549 646 aa2.76□□□□□ -1.97
VPS16YPL045W NIT3P49954 291 aa2.76□□□□□ -1.97
VPS16YPL045W GIR2Q03768 265 aaPredicted RBP2.76□□□□□ -1.97
VPS16YPL045W NHX1Q04121 633 aa2.76□□□□□ -1.97
VPS16YPL045W YMR074CQ04773 145 aa2.76□□□□□ -1.97
VPS16YPL045W YLR346CQ06139 101 aa2.76□□□□□ -1.97
VPS16YPL045W YLL054CQ12244 843 aa2.76□□□□□ -1.97
VPS16YPL045W YDR461C-AQ2V2P7 80 aa2.76□□□□□ -1.97
VPS16YPL045W HIR3P47171 1648 aa2.76□□□□□ -1.97
VPS16YPL045W CCR4P31384 837 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W SSH4P32343 579 aa2.75□□□□□ -1.97
VPS16YPL045W MFT1P33441 392 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W YGR153WP48238 217 aa2.75□□□□□ -1.97
VPS16YPL045W LYS5P50113 272 aa2.75□□□□□ -1.97
VPS16YPL045W PSR2Q07949 397 aa2.75□□□□□ -1.97
VPS16YPL045W ELG1Q12050 791 aa2.75□□□□□ -1.97
VPS16YPL045W SPA2P23201 1466 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W MSS18P08593 268 aa2.75□□□□□ -1.97
VPS16YPL045W COX11P19516 300 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W NAR1P23503 491 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W YKR078WP36158 585 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W GLY1P37303 387 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W NMD3P38861 518 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W RPN3P40016 523 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W RET2P43621 546 aa2.75□□□□□ -1.97
VPS16YPL045W HXT16P47185 567 aa2.75□□□□□ -1.97
VPS16YPL045W GYP7P48365 746 aa2.75□□□□□ -1.97
VPS16YPL045W SLD3P53135 668 aa2.75□□□□□ -1.97
VPS16YPL045W NCE103P53615 221 aa2.75□□□□□ -1.97
VPS16YPL045W PAP2P53632 584 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W YML131WQ03102 365 aa2.75□□□□□ -1.97
VPS16YPL045W YLR257WQ06146 321 aaKnown RBP2.75□□□□□ -1.97
VPS16YPL045W MDM38Q08179 573 aa2.75□□□□□ -1.97
VPS16YPL045W SLP1Q12232 587 aa2.75□□□□□ -1.97
VPS16YPL045W TY4B-PA0A0B7P3V8 1104 aa2.74□□□□□ -1.97
VPS16YPL045W RPS21AP0C0V8 87 aaKnown RBP2.74□□□□□ -1.97
VPS16YPL045W ENA1P13587 1091 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms