RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	GNT1	Q12096	491 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	AAR2	P32357	355 aa	Predicted RBP	4.87	□□□□□ -1.63
CAF20	YOR276W	DSS1	P39112	969 aa		4.87	□□□□□ -1.63
CAF20	YOR276W	NUG1	P40010	520 aa	Known RBP	4.87	□□□□□ -1.63
CAF20	YOR276W	TPO2	P53283	614 aa		4.87	□□□□□ -1.63
CAF20	YOR276W	RSC58	Q07979	502 aa		4.87	□□□□□ -1.63
CAF20	YOR276W	YPL277C	Q08989	487 aa		4.87	□□□□□ -1.63
CAF20	YOR276W	MSD1	P15179	658 aa	Known RBP	4.86	□□□□□ -1.63
CAF20	YOR276W	MEF1	P25039	761 aa		4.86	□□□□□ -1.63
CAF20	YOR276W	UBP6	P43593	499 aa	Known RBP	4.86	□□□□□ -1.63
CAF20	YOR276W	DUS3	Q06053	668 aa	Known RBP	4.86	□□□□□ -1.63
CAF20	YOR276W	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
CAF20	YOR276W	NBA1	Q08229	501 aa	Known RBP	4.86	□□□□□ -1.63
CAF20	YOR276W	YPR071W	Q12346	211 aa		4.86	□□□□□ -1.63
CAF20	YOR276W	RPS13	P05756	151 aa	Known RBP	4.85	□□□□□ -1.63
CAF20	YOR276W	YER152C	P10356	443 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	PPH3	P32345	308 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	DOM34	P33309	386 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	TOD6	P34219	525 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	GRX7	P38068	203 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	GPB2	P39717	880 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CAF20	YOR276W	ENV11	P53246	860 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	FOL1	P53848	824 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	NUP145	P49687	1317 aa		4.85	□□□□□ -1.63
CAF20	YOR276W	COQ4	O13525	335 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	KIP1	P28742	1111 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	BAP2	P38084	609 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	YGR237C	P50089	785 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	YNL193W	P53870	558 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	RCL1	Q08096	367 aa	Predicted RBP	4.84	□□□□□ -1.63
CAF20	YOR276W	SPO21	Q12411	609 aa		4.84	□□□□□ -1.63
CAF20	YOR276W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CAF20	YOR276W	SPS1	P08458	490 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	RPL11A	P0C0W9	174 aa	Known RBP	4.83	□□□□□ -1.64
CAF20	YOR276W	RAD53	P22216	821 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	DBP2	P24783	546 aa	Known RBP	4.83	□□□□□ -1.64
CAF20	YOR276W	VBA3	P25594	458 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	PET10	P36139	283 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	YRO2	P38079	344 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	ERT1	P38140	529 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	CCZ1	P38273	704 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	PNT1	P38969	423 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	MXR1	P40029	184 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	YDR132C	Q03900	495 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	YPL260W	Q08977	551 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	RPL11B	Q3E757	174 aa	Predicted RBP	4.83	□□□□□ -1.64
CAF20	YOR276W	MDM12	Q92328	271 aa		4.83	□□□□□ -1.64
CAF20	YOR276W	GSY1	P23337	708 aa		4.82	□□□□□ -1.64
CAF20	YOR276W	SIT1	P39980	628 aa		4.82	□□□□□ -1.64
CAF20	YOR276W	ALG2	P43636	503 aa		4.82	□□□□□ -1.64
CAF20	YOR276W	SDA1	P53313	767 aa	Known RBP	4.82	□□□□□ -1.64
CAF20	YOR276W	HOS3	Q02959	697 aa	Known RBP	4.82	□□□□□ -1.64
CAF20	YOR276W	THI73	Q07904	523 aa		4.82	□□□□□ -1.64
CAF20	YOR276W	TMA17	Q12513	150 aa		4.82	□□□□□ -1.64
CAF20	YOR276W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
CAF20	YOR276W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
CAF20	YOR276W	SAH1	P39954	449 aa	Known RBP	4.81	□□□□□ -1.64
CAF20	YOR276W	TPM2	P40414	161 aa		4.81	□□□□□ -1.64
CAF20	YOR276W	SEC26	P41810	973 aa	Known RBP	4.81	□□□□□ -1.64
CAF20	YOR276W	PMT3	P47190	753 aa		4.81	□□□□□ -1.64
CAF20	YOR276W	TNA1	P53322	534 aa		4.81	□□□□□ -1.64
CAF20	YOR276W	UME1	Q03010	460 aa		4.81	□□□□□ -1.64
CAF20	YOR276W	ADE8	P04161	214 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	SNF5	P18480	905 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	MRC1	P25588	1096 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	PAF1	P38351	445 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	PIK1	P39104	1066 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	RPN3	P40016	523 aa	Known RBP	4.8	□□□□□ -1.64
CAF20	YOR276W	YJR120W	P47157	116 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	CLU1	Q03690	1277 aa	Known RBP	4.8	□□□□□ -1.64
CAF20	YOR276W	LCD1	Q04377	747 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	YLR001C	Q07895	862 aa		4.8	□□□□□ -1.64
CAF20	YOR276W	YLR358C	O13565	187 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	CDC9	P04819	755 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	CDC12	P32468	407 aa	Known RBP	4.79	□□□□□ -1.64
CAF20	YOR276W	TOK1	P40310	691 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	YFL054C	P43549	646 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	GPG1	P53130	126 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
CAF20	YOR276W	SGD1	Q06132	899 aa		4.79	□□□□□ -1.64
CAF20	YOR276W	FAP7	Q12055	197 aa	Predicted RBP	4.79	□□□□□ -1.64
CAF20	YOR276W	NPP1	P25353	742 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	AFR1	P33304	620 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	SPC29	P33419	253 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	LAM1	P38851	1228 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	MEF2	P39677	819 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	BUL2	Q03758	920 aa	Known RBP	4.78	□□□□□ -1.64
CAF20	YOR276W	HRQ1	Q05549	1077 aa		4.78	□□□□□ -1.64
CAF20	YOR276W	SRD1	P09007	221 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	RAD18	P10862	487 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	SCT1	P32784	759 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	SLA2	P33338	968 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	TYS1	P36421	394 aa	Known RBP	4.77	□□□□□ -1.65
CAF20	YOR276W	ABZ1	P37254	787 aa	Predicted RBP	4.77	□□□□□ -1.65
CAF20	YOR276W	GCN5	Q03330	439 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	RSB1	Q08417	382 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	YOR352W	Q08816	343 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	ACM1	Q08981	209 aa		4.77	□□□□□ -1.65
CAF20	YOR276W	CYC1	P00044	109 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms