RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	CCT5	P40413	562 aa	Known RBP	11.8	□□□□□ -0.52
YSP3	YOR003W	HYR1	P40581	163 aa	Known RBP	11.8	□□□□□ -0.52
YSP3	YOR003W	TOF1	P53840	1238 aa		11.8	□□□□□ -0.52
YSP3	YOR003W	CIR1	P42940	261 aa		11.79	□□□□□ -0.52
YSP3	YOR003W	CUS1	Q02554	436 aa	Predicted RBP	11.79	□□□□□ -0.52
YSP3	YOR003W	YDL057W	Q07379	328 aa		11.79	□□□□□ -0.52
YSP3	YOR003W	VPS13	Q07878	3144 aa		11.78	□□□□□ -0.52
YSP3	YOR003W	HIR1	P32479	840 aa		11.78	□□□□□ -0.52
YSP3	YOR003W	DRE2	P36152	348 aa		11.78	□□□□□ -0.52
YSP3	YOR003W	VTC2	P43585	828 aa		11.78	□□□□□ -0.52
YSP3	YOR003W	FOL2	P51601	243 aa	Known RBP	11.78	□□□□□ -0.52
YSP3	YOR003W	DDP1	Q99321	188 aa	Known RBP	11.78	□□□□□ -0.52
YSP3	YOR003W	SAC6	P32599	642 aa	Known RBP	11.77	□□□□□ -0.52
YSP3	YOR003W	ELM1	P32801	640 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	YER130C	P39959	443 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	RTT102	P53330	157 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	YPL216W	Q08964	1102 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	HIF1	Q12373	385 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	UBR2	Q07963	1872 aa		11.77	□□□□□ -0.52
YSP3	YOR003W	GPA1	P08539	472 aa		11.77	□□□□□ -0.53
YSP3	YOR003W	KEX1	P09620	729 aa		11.77	□□□□□ -0.53
YSP3	YOR003W	MUK1	Q02866	612 aa		11.77	□□□□□ -0.53
YSP3	YOR003W	TLG2	Q08144	397 aa		11.77	□□□□□ -0.53
YSP3	YOR003W	IES4	Q08561	116 aa		11.77	□□□□□ -0.53
YSP3	YOR003W	COT1	P32798	439 aa		11.76	□□□□□ -0.53
YSP3	YOR003W	YPT11	P48559	417 aa		11.76	□□□□□ -0.53
YSP3	YOR003W	YDR090C	Q03193	310 aa		11.76	□□□□□ -0.53
YSP3	YOR003W	WHI2	P12611	486 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	DAL7	P21826	554 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	YKT6	P36015	200 aa	Known RBP	11.75	□□□□□ -0.53
YSP3	YOR003W	BRL1	P38770	471 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	YNL146W	P53906	100 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	HAP5	Q02516	242 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	HFI1	Q12060	488 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	TRS33	Q99394	268 aa		11.75	□□□□□ -0.53
YSP3	YOR003W	RPC53	P25441	422 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	FUB1	P25659	250 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	NAM7	P30771	971 aa	Known RBP	11.74	□□□□□ -0.53
YSP3	YOR003W	TMT1	P32643	299 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	YEL1	P34225	687 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	YFL034W	P43564	1073 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	JJJ3	P47138	172 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	CAF130	P53280	1122 aa	Predicted RBP	11.74	□□□□□ -0.53
YSP3	YOR003W	YPL277C	Q08989	487 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	OSW2	Q12202	724 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	AHC1	Q12433	566 aa		11.74	□□□□□ -0.53
YSP3	YOR003W	SWI6	P09959	803 aa		11.73	□□□□□ -0.53
YSP3	YOR003W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
YSP3	YOR003W	IME2	P32581	645 aa		11.73	□□□□□ -0.53
YSP3	YOR003W	YSC83	P32792	385 aa		11.73	□□□□□ -0.53
YSP3	YOR003W	TAM41	P53230	385 aa		11.73	□□□□□ -0.53
YSP3	YOR003W	TAO3	P40468	2376 aa		11.72	□□□□□ -0.53
YSP3	YOR003W	UBP13	P38187	747 aa		11.72	□□□□□ -0.53
YSP3	YOR003W	VID24	P38263	362 aa		11.72	□□□□□ -0.53
YSP3	YOR003W	RVS167	P39743	482 aa	Known RBP	11.72	□□□□□ -0.53
YSP3	YOR003W	GCV2	P49095	1034 aa		11.72	□□□□□ -0.53
YSP3	YOR003W	NBP1	P52919	319 aa	Predicted RBP	11.72	□□□□□ -0.53
YSP3	YOR003W	SEC5	P89102	971 aa		11.72	□□□□□ -0.53
YSP3	YOR003W	ADE4	P04046	510 aa	Known RBP	11.71	□□□□□ -0.53
YSP3	YOR003W	BIM1	P40013	344 aa		11.71	□□□□□ -0.53
YSP3	YOR003W	MNP1	P53163	194 aa	Predicted RBP	11.71	□□□□□ -0.53
YSP3	YOR003W	CUL3	P53202	744 aa		11.71	□□□□□ -0.53
YSP3	YOR003W	ENV11	P53246	860 aa		11.71	□□□□□ -0.53
YSP3	YOR003W	LSC2	P53312	427 aa		11.71	□□□□□ -0.53
YSP3	YOR003W	ZPS1	Q12512	249 aa		11.71	□□□□□ -0.53
YSP3	YOR003W	PCK1	P10963	549 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	TRK2	P28584	889 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	MSP1	P28737	362 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	YKL091C	P33324	310 aa	Known RBP	11.7	□□□□□ -0.54
YSP3	YOR003W	MNN4	P36044	1178 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	MSC7	P38694	644 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	EAR1	Q03212	550 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	YOL075C	Q08234	1294 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	AFT2	Q08957	416 aa		11.7	□□□□□ -0.54
YSP3	YOR003W	ADE2	P21264	571 aa	Known RBP	11.69	□□□□□ -0.54
YSP3	YOR003W	DPH2	P32461	534 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	VPS35	P34110	944 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	POA1	P38218	177 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	UBX7	P38349	436 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	JHD1	P40034	492 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	HUL4	P40985	892 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	SPO74	P45819	413 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
YSP3	YOR003W	YGR035C	P53222	116 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	VTC3	Q02725	835 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	MAG2	Q06436	670 aa	Known RBP	11.69	□□□□□ -0.54
YSP3	YOR003W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
YSP3	YOR003W	RSM25	P40496	264 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	LAM5	P43560	674 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	TOS3	P43637	560 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	CCM1	P48237	864 aa	Predicted RBP	11.69	□□□□□ -0.54
YSP3	YOR003W	ORC5	P50874	479 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	YVH1	Q02256	364 aa	Known RBP	11.69	□□□□□ -0.54
YSP3	YOR003W	DOT1	Q04089	582 aa	Known RBP	11.69	□□□□□ -0.54
YSP3	YOR003W	CUR1	Q06469	252 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	PCD1	Q12524	340 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	AIM44	Q99299	758 aa		11.69	□□□□□ -0.54
YSP3	YOR003W	TOM70	P07213	617 aa	Known RBP	11.68	□□□□□ -0.54
YSP3	YOR003W	PHO8	P11491	566 aa		11.68	□□□□□ -0.54
YSP3	YOR003W	PSO2	P30620	661 aa		11.68	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms