RNA–Protein interactions for RNA: YNL073W

MSK1, Transcript of Mitochondrial lysine-tRNA synthetase, yeast

Gene MSK1, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSK1	YNL073W	YGL081W	P53156	320 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	TCO89	Q08921	799 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	APC11	Q12157	165 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	YDR524C-B	Q3E6R4	66 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	VPS13	Q07878	3144 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	DBP5	P20449	482 aa	Known RBP	4.56	□□□□□ -1.68
MSK1	YNL073W	RPC53	P25441	422 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	CDC48	P25694	835 aa	Known RBP	4.56	□□□□□ -1.68
MSK1	YNL073W	RPN12	P32496	274 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	TMT1	P32643	299 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	YSC83	P32792	385 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	CAB3	P36076	571 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	GRS1	P38088	690 aa	Known RBP	4.56	□□□□□ -1.68
MSK1	YNL073W	PIH1	P38768	344 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	YAP1801	P38856	637 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	SHE10	P53075	577 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	ARK1	P53974	638 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	EAR1	Q03212	550 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	ECM7	Q06200	448 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	YPL277C	Q08989	487 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	TAO3	P40468	2376 aa		4.56	□□□□□ -1.68
MSK1	YNL073W	MAK16	P10962	306 aa	Predicted RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	FUB1	P25659	250 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	CDC15	P27636	974 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	MNN4	P36044	1178 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	BRL1	P38770	471 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	RVS167	P39743	482 aa	Known RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	YER130C	P39959	443 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	EAF5	P39995	279 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	ULP2	P40537	1034 aa	Predicted RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	HUL4	P40985	892 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	YFL034W	P43564	1073 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	YGR035C	P53222	116 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	RTT102	P53330	157 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	IES4	Q08561	116 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	OSW2	Q12202	724 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	TIF1	P10081	395 aa	Known RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	TAF13	P11747	167 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	ROX1	P25042	368 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
MSK1	YNL073W	NAM7	P30771	971 aa	Known RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	KTR2	P33550	425 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	MRX3	P38172	270 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	RRM3	P38766	723 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	DJP1	P40564	432 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	EAF7	P53911	425 aa	Known RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	COG4	Q06096	861 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	YDL057W	Q07379	328 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	NOC3	Q07896	663 aa	Predicted RBP	4.55	□□□□□ -1.68
MSK1	YNL073W	PSR2	Q07949	397 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	MED1	Q12321	566 aa		4.55	□□□□□ -1.68
MSK1	YNL073W	PHO8	P11491	566 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	GSY2	P27472	705 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	ARL1	P38116	183 aa	Known RBP	4.54	□□□□□ -1.68
MSK1	YNL073W	MSC7	P38694	644 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	NPR3	P38742	1146 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	TVP23	P38962	199 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	SPO74	P45819	413 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	ACF4	P47129	309 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	ISM1	P48526	1002 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	YGR130C	P53278	816 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	MUK1	Q02866	612 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	VPS72	Q03388	795 aa		4.54	□□□□□ -1.68
MSK1	YNL073W	CDC53	Q12018	815 aa	Known RBP	4.54	□□□□□ -1.68
MSK1	YNL073W	WHI2	P12611	486 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	MRF1	P30775	413 aa	Predicted RBP	4.53	□□□□□ -1.68
MSK1	YNL073W	BIO2	P32451	375 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	SAC6	P32599	642 aa	Known RBP	4.53	□□□□□ -1.68
MSK1	YNL073W	PPS1	P38148	807 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	TFG2	P41896	400 aa	Predicted RBP	4.53	□□□□□ -1.68
MSK1	YNL073W	AVT1	P47082	602 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	FOL2	P51601	243 aa	Known RBP	4.53	□□□□□ -1.68
MSK1	YNL073W	NBP1	P52919	319 aa	Predicted RBP	4.53	□□□□□ -1.68
MSK1	YNL073W	TAM41	P53230	385 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	TOF1	P53840	1238 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	YNL146W	P53906	100 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	VTC3	Q02725	835 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	NCR1	Q12200	1170 aa		4.53	□□□□□ -1.68
MSK1	YNL073W	SWI6	P09959	803 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	ADE2	P21264	571 aa	Known RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	SKG6	P32900	734 aa	Predicted RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	YKL091C	P33324	310 aa	Known RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	DID4	P36108	232 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	ADE17	P38009	592 aa	Known RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	EFM2	P38347	419 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	BIM1	P40013	344 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	FIG4	P42837	879 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	SGM1	P47166	707 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	CCM1	P48237	864 aa	Predicted RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	YGR237C	P50089	785 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	MNP1	P53163	194 aa	Predicted RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	CUL3	P53202	744 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	ENV11	P53246	860 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	SKY1	Q03656	742 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	DOT1	Q04089	582 aa	Known RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	DON1	Q05610	365 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	SPP382	Q06411	708 aa	Predicted RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	RLP24	Q07915	199 aa	Known RBP	4.52	□□□□□ -1.69
MSK1	YNL073W	TLG2	Q08144	397 aa		4.52	□□□□□ -1.69
MSK1	YNL073W	PCD1	Q12524	340 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms