RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C KAP122P32767 1081 aa2.48□□□□□ -2.01
CSF1YLR087C VAM7P32912 316 aa2.48□□□□□ -2.01
CSF1YLR087C YHB1P39676 399 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C CCC1P47818 322 aa2.48□□□□□ -2.01
CSF1YLR087C HST3P53687 447 aa2.48□□□□□ -2.01
CSF1YLR087C FAP1P53971 965 aa2.48□□□□□ -2.01
CSF1YLR087C UTP5Q04177 643 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C RKM1Q08961 583 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C ULS1Q08562 1619 aa2.48□□□□□ -2.01
CSF1YLR087C RIM15P43565 1770 aa2.48□□□□□ -2.01
CSF1YLR087C CLB1P24868 471 aa2.48□□□□□ -2.01
CSF1YLR087C YTA12P40341 825 aa2.48□□□□□ -2.01
CSF1YLR087C JHD2P47156 728 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C YNR063WP53749 607 aa2.48□□□□□ -2.01
CSF1YLR087C MRS2Q01926 470 aa2.48□□□□□ -2.01
CSF1YLR087C HAP5Q02516 242 aa2.48□□□□□ -2.01
CSF1YLR087C BUD22Q04347 519 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C DUS4Q06063 367 aa2.48□□□□□ -2.01
CSF1YLR087C STE5P32917 917 aa2.48□□□□□ -2.01
CSF1YLR087C ESL2P36168 1195 aa2.48□□□□□ -2.01
CSF1YLR087C ATG14P38270 344 aa2.48□□□□□ -2.01
CSF1YLR087C YSW1P38280 609 aa2.48□□□□□ -2.01
CSF1YLR087C VID28P40547 921 aa2.48□□□□□ -2.01
CSF1YLR087C YML6P51998 286 aa2.48□□□□□ -2.01
CSF1YLR087C YML108WQ03759 105 aa2.48□□□□□ -2.01
CSF1YLR087C GSY1P23337 708 aa2.48□□□□□ -2.01
CSF1YLR087C PEX1P24004 1043 aa2.48□□□□□ -2.01
CSF1YLR087C CAD1P24813 409 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C SEC20P28791 383 aa2.48□□□□□ -2.01
CSF1YLR087C PLC1P32383 869 aa2.48□□□□□ -2.01
CSF1YLR087C VMA8P32610 256 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C NMD3P38861 518 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C CNN1P43618 361 aa2.48□□□□□ -2.01
CSF1YLR087C ACF4P47129 309 aa2.48□□□□□ -2.01
CSF1YLR087C RPA14P50106 137 aa2.48□□□□□ -2.01
CSF1YLR087C PAN2P53010 1115 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C TRS130Q03660 1102 aa2.48□□□□□ -2.01
CSF1YLR087C ATG13Q06628 738 aa2.48□□□□□ -2.01
CSF1YLR087C PML1Q07930 204 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C POL3P15436 1097 aa2.48□□□□□ -2.01
CSF1YLR087C RGP1P16664 663 aa2.48□□□□□ -2.01
CSF1YLR087C GVP36P40531 326 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C YTP1P53584 459 aa2.48□□□□□ -2.01
CSF1YLR087C CNM67P53865 581 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C VIP1Q06685 1146 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C VIK1Q12045 647 aa2.48□□□□□ -2.01
CSF1YLR087C PDR11P40550 1411 aa2.48□□□□□ -2.01
CSF1YLR087C ADK1P07170 222 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C TPS2P31688 896 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C DLD1P32891 587 aa2.48□□□□□ -2.01
CSF1YLR087C YHR020WP38708 688 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C SPC97P38863 823 aa2.48□□□□□ -2.01
CSF1YLR087C BUD6P41697 788 aa2.48□□□□□ -2.01
CSF1YLR087C MNT4P53745 580 aa2.48□□□□□ -2.01
CSF1YLR087C RTC4P53850 401 aa2.48□□□□□ -2.01
CSF1YLR087C RIO1Q12196 484 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C SNU66Q12420 587 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C PHO81P17442 1178 aa2.48□□□□□ -2.01
CSF1YLR087C OSM1P21375 501 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C YBR225WP38321 900 aa2.48□□□□□ -2.01
CSF1YLR087C PIK1P39104 1066 aa2.48□□□□□ -2.01
CSF1YLR087C MAD1P40957 749 aa2.48□□□□□ -2.01
CSF1YLR087C MSE1P48525 536 aa2.48□□□□□ -2.01
CSF1YLR087C YGL140CP53120 1219 aa2.48□□□□□ -2.01
CSF1YLR087C DUS1P53759 423 aaKnown RBP2.48□□□□□ -2.01
CSF1YLR087C UBP10P53874 792 aaPredicted RBP2.48□□□□□ -2.01
CSF1YLR087C REG1Q00816 1014 aa2.48□□□□□ -2.01
CSF1YLR087C PPN1Q04119 674 aa2.48□□□□□ -2.01
CSF1YLR087C ATG9Q12142 997 aa2.48□□□□□ -2.01
CSF1YLR087C CBP2P03874 630 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C SIR3P06701 978 aa2.47□□□□□ -2.01
CSF1YLR087C PRO3P32263 286 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C CCT5P40413 562 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C SAM3Q08986 587 aa2.47□□□□□ -2.01
CSF1YLR087C QCR7P00128 127 aa2.47□□□□□ -2.01
CSF1YLR087C PRP22P24384 1145 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C IDP2P41939 412 aa2.47□□□□□ -2.01
CSF1YLR087C TRF5P48561 642 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C HMO1Q03973 246 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C FUS2Q05670 677 aa2.47□□□□□ -2.01
CSF1YLR087C CST9Q06032 482 aa2.47□□□□□ -2.01
CSF1YLR087C TLG2Q08144 397 aa2.47□□□□□ -2.01
CSF1YLR087C FMP40Q08968 688 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C DAP1Q12091 152 aa2.47□□□□□ -2.01
CSF1YLR087C MED1Q12321 566 aa2.47□□□□□ -2.01
CSF1YLR087C RAD1P06777 1100 aa2.47□□□□□ -2.01
CSF1YLR087C SEC66P33754 206 aa2.47□□□□□ -2.01
CSF1YLR087C IML2P47031 731 aa2.47□□□□□ -2.01
CSF1YLR087C SRC1Q03707 834 aa2.47□□□□□ -2.01
CSF1YLR087C YLL054CQ12244 843 aa2.47□□□□□ -2.01
CSF1YLR087C MED4Q12343 284 aa2.47□□□□□ -2.01
CSF1YLR087C YPR089WO13585 888 aa2.47□□□□□ -2.01
CSF1YLR087C HXK1P04806 485 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C LEU1P07264 779 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C CDC16P09798 840 aa2.47□□□□□ -2.01
CSF1YLR087C MTF2P10849 440 aa2.47□□□□□ -2.01
CSF1YLR087C NGG1P32494 702 aa2.47□□□□□ -2.01
CSF1YLR087C KDX1P36005 433 aa2.47□□□□□ -2.01
CSF1YLR087C ABZ1P37254 787 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C KTR4P38131 464 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms