RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC58	YLR033W	FCP1	Q03254	732 aa		5.06	□□□□□ -1.6
RSC58	YLR033W	YBL113C	Q7M4S9	792 aa		5.06	□□□□□ -1.6
RSC58	YLR033W	AIM26	P32858	118 aa		5.05	□□□□□ -1.6
RSC58	YLR033W	ABZ1	P37254	787 aa	Predicted RBP	5.05	□□□□□ -1.6
RSC58	YLR033W	SHM2	P37291	469 aa	Known RBP	5.05	□□□□□ -1.6
RSC58	YLR033W	ERP5	P38819	212 aa		5.05	□□□□□ -1.6
RSC58	YLR033W	RAT1	Q02792	1006 aa	Known RBP	5.05	□□□□□ -1.6
RSC58	YLR033W	YJR008W	P47085	338 aa		5.04	□□□□□ -1.6
RSC58	YLR033W	EAF6	P47128	113 aa		5.04	□□□□□ -1.6
RSC58	YLR033W	CLU1	Q03690	1277 aa	Known RBP	5.04	□□□□□ -1.6
RSC58	YLR033W	RPS19A	P07280	144 aa	Known RBP	5.03	□□□□□ -1.6
RSC58	YLR033W	RPS19B	P07281	144 aa	Predicted RBP	5.03	□□□□□ -1.6
RSC58	YLR033W	TRL1	P09880	827 aa	Known RBP	5.03	□□□□□ -1.6
RSC58	YLR033W	YNG2	P38806	282 aa	Known RBP	5.03	□□□□□ -1.6
RSC58	YLR033W	POL32	P47110	350 aa		5.03	□□□□□ -1.6
RSC58	YLR033W	DUR1,2	P32528	1835 aa	Known RBP	5.03	□□□□□ -1.6
RSC58	YLR033W	YLR358C	O13565	187 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	CAF20	P12962	161 aa	Known RBP	5.02	□□□□□ -1.61
RSC58	YLR033W	MDL2	P33311	773 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	UBP12	P39538	1254 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	SPO1	P53541	631 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	YNR063W	P53749	607 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	GSF2	Q04697	403 aa	Known RBP	5.02	□□□□□ -1.61
RSC58	YLR033W	BDF2	Q07442	638 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	GRS1	P38088	690 aa	Known RBP	5.02	□□□□□ -1.61
RSC58	YLR033W	SHU2	P38957	223 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
RSC58	YLR033W	RSA3	Q05942	220 aa	Known RBP	5.02	□□□□□ -1.61
RSC58	YLR033W	IRC3	Q06683	689 aa		5.02	□□□□□ -1.61
RSC58	YLR033W	SSK22	P25390	1331 aa	Predicted RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	HKR1	P41809	1802 aa		5.01	□□□□□ -1.61
RSC58	YLR033W	FAS2	P19097	1887 aa	Known RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	TUB2	P02557	457 aa	Known RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	SMY1	P32364	656 aa	Known RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	FPR3	P38911	411 aa	Known RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	MDJ2	P42834	146 aa		5.01	□□□□□ -1.61
RSC58	YLR033W	SEN54	Q02825	467 aa	Predicted RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	UTP5	Q04177	643 aa	Known RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	DIB1	Q06819	143 aa	Predicted RBP	5.01	□□□□□ -1.61
RSC58	YLR033W	CTS1	P29029	562 aa		5	□□□□□ -1.61
RSC58	YLR033W	SLD2	P34252	453 aa		5	□□□□□ -1.61
RSC58	YLR033W	PFF1	P38244	976 aa		5	□□□□□ -1.61
RSC58	YLR033W	GPI13	Q07830	1017 aa		5	□□□□□ -1.61
RSC58	YLR033W	NOC3	Q07896	663 aa	Predicted RBP	5	□□□□□ -1.61
RSC58	YLR033W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RSC58	YLR033W	FRD1	P32614	470 aa	Known RBP	4.99	□□□□□ -1.61
RSC58	YLR033W	ERT1	P38140	529 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	HSE1	P38753	452 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	YJL045W	P47052	634 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	PEX13	P80667	386 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	KIN4	Q01919	800 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	UBP16	Q02863	499 aa		4.99	□□□□□ -1.61
RSC58	YLR033W	CTT1	P06115	562 aa		4.98	□□□□□ -1.61
RSC58	YLR033W	MSH3	P25336	1018 aa		4.98	□□□□□ -1.61
RSC58	YLR033W	GCD7	P32502	381 aa	Predicted RBP	4.98	□□□□□ -1.61
RSC58	YLR033W	NMD2	P38798	1089 aa	Known RBP	4.98	□□□□□ -1.61
RSC58	YLR033W	SYF1	Q04048	859 aa	Predicted RBP	4.98	□□□□□ -1.61
RSC58	YLR033W	HRK1	Q08732	759 aa	Known RBP	4.98	□□□□□ -1.61
RSC58	YLR033W	LAP2	Q10740	671 aa		4.98	□□□□□ -1.61
RSC58	YLR033W	SNU66	Q12420	587 aa	Predicted RBP	4.98	□□□□□ -1.61
RSC58	YLR033W	SAC3	P46674	1301 aa		4.98	□□□□□ -1.61
RSC58	YLR033W	SUP35	P05453	685 aa	Known RBP	4.97	□□□□□ -1.61
RSC58	YLR033W	ATG14	P38270	344 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	STM1	P39015	273 aa	Known RBP	4.97	□□□□□ -1.61
RSC58	YLR033W	SPT20	P50875	604 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	NOG1	Q02892	647 aa	Known RBP	4.97	□□□□□ -1.61
RSC58	YLR033W	ERO1	Q03103	563 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	YOR352W	Q08816	343 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	PNS1	Q12412	539 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	SRO9	P25567	434 aa	Known RBP	4.97	□□□□□ -1.61
RSC58	YLR033W	YHL050C	P38721	697 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	YHR219W	P38900	624 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
RSC58	YLR033W	THI3	Q07471	609 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	FRT1	Q99332	602 aa		4.97	□□□□□ -1.61
RSC58	YLR033W	FIG2	P25653	1609 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	TOP1	P04786	769 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	SPS1	P08458	490 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	ICL1	P28240	557 aa	Predicted RBP	4.96	□□□□□ -1.62
RSC58	YLR033W	MGM1	P32266	881 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	YCS4	Q06156	1176 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	NUT2	Q06213	157 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	RSC58	Q07979	502 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	NCB2	Q92317	146 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	TAD3	Q9URQ3	322 aa		4.96	□□□□□ -1.62
RSC58	YLR033W	QNS1	P38795	714 aa	Known RBP	4.95	□□□□□ -1.62
RSC58	YLR033W	TAT2	P38967	592 aa		4.95	□□□□□ -1.62
RSC58	YLR033W	SAM37	P50110	327 aa		4.95	□□□□□ -1.62
RSC58	YLR033W	RPT4	P53549	437 aa	Known RBP	4.95	□□□□□ -1.62
RSC58	YLR033W	MSC6	Q08818	692 aa	Known RBP	4.95	□□□□□ -1.62
RSC58	YLR033W	SEC18	P18759	758 aa	Known RBP	4.94	□□□□□ -1.62
RSC58	YLR033W	UGA4	P32837	571 aa		4.94	□□□□□ -1.62
RSC58	YLR033W	RFC1	P38630	861 aa	Known RBP	4.94	□□□□□ -1.62
RSC58	YLR033W	SPL2	P38839	148 aa		4.94	□□□□□ -1.62
RSC58	YLR033W	SQS1	P53866	767 aa	Known RBP	4.94	□□□□□ -1.62
RSC58	YLR033W	YDR132C	Q03900	495 aa		4.94	□□□□□ -1.62
RSC58	YLR033W	RCL1	Q08096	367 aa	Predicted RBP	4.94	□□□□□ -1.62
RSC58	YLR033W	GRX6	Q12438	231 aa		4.94	□□□□□ -1.62
RSC58	YLR033W	KRE2	P27809	442 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	YSC84	P32793	468 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms