RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C PPR1P07272 904 aaPredicted RBP4.88□□□□□ -1.63
CMS1YLR003C RTT10Q08924 1013 aa4.88□□□□□ -1.63
CMS1YLR003C FUN30P31380 1131 aa4.87□□□□□ -1.63
CMS1YLR003C SRT1Q03175 343 aa4.87□□□□□ -1.63
CMS1YLR003C ALG7P07286 448 aa4.86□□□□□ -1.63
CMS1YLR003C YKL151CP36059 337 aa4.86□□□□□ -1.63
CMS1YLR003C HRQ1Q05549 1077 aa4.85□□□□□ -1.63
CMS1YLR003C TMA46Q12000 345 aaKnown RBP4.85□□□□□ -1.63
CMS1YLR003C UPC2Q12151 913 aa4.85□□□□□ -1.63
CMS1YLR003C GIC1P38785 314 aa4.84□□□□□ -1.63
CMS1YLR003C HBT1Q07653 1046 aaKnown RBP4.84□□□□□ -1.63
CMS1YLR003C LYP1P32487 611 aa4.83□□□□□ -1.64
CMS1YLR003C PEX2P32800 271 aa4.83□□□□□ -1.64
CMS1YLR003C IPL1P38991 367 aa4.83□□□□□ -1.64
CMS1YLR003C SDS3P40505 327 aa4.82□□□□□ -1.64
CMS1YLR003C YPL066WQ12194 479 aa4.82□□□□□ -1.64
CMS1YLR003C TRM13Q12383 476 aa4.82□□□□□ -1.64
CMS1YLR003C RKM4Q12504 494 aa4.82□□□□□ -1.64
CMS1YLR003C INO1P11986 533 aa4.81□□□□□ -1.64
CMS1YLR003C SED4P25365 1065 aa4.81□□□□□ -1.64
CMS1YLR003C MCM2P29469 868 aa4.81□□□□□ -1.64
CMS1YLR003C AFT2Q08957 416 aa4.81□□□□□ -1.64
CMS1YLR003C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
CMS1YLR003C TRP2P00899 507 aaKnown RBP4.8□□□□□ -1.64
CMS1YLR003C STE14P32584 239 aa4.79□□□□□ -1.64
CMS1YLR003C YKL107WP34251 309 aa4.79□□□□□ -1.64
CMS1YLR003C MOT2P34909 587 aaKnown RBP4.79□□□□□ -1.64
CMS1YLR003C MGE1P38523 228 aa4.79□□□□□ -1.64
CMS1YLR003C YGL176CP46945 554 aa4.79□□□□□ -1.64
CMS1YLR003C ERG5P54781 538 aa4.79□□□□□ -1.64
CMS1YLR003C HOF1Q05080 669 aa4.79□□□□□ -1.64
CMS1YLR003C RPC82P32349 654 aa4.78□□□□□ -1.64
CMS1YLR003C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
CMS1YLR003C SPR28Q04921 423 aa4.78□□□□□ -1.64
CMS1YLR003C ESF1Q06344 628 aaKnown RBP4.78□□□□□ -1.64
CMS1YLR003C MRH1Q12117 320 aaPredicted RBP4.78□□□□□ -1.64
CMS1YLR003C SAH1P39954 449 aaKnown RBP4.77□□□□□ -1.65
CMS1YLR003C TYW3P53177 273 aa4.77□□□□□ -1.65
CMS1YLR003C SLU7Q02775 382 aaKnown RBP4.77□□□□□ -1.65
CMS1YLR003C YHL017WP38745 532 aa4.76□□□□□ -1.65
CMS1YLR003C NPP2P39997 493 aa4.76□□□□□ -1.65
CMS1YLR003C DAS1P47005 663 aa4.76□□□□□ -1.65
CMS1YLR003C SFB2P53953 876 aa4.76□□□□□ -1.65
CMS1YLR003C COQ11Q05892 277 aa4.76□□□□□ -1.65
CMS1YLR003C ICT1Q12385 394 aa4.76□□□□□ -1.65
CMS1YLR003C BNR1P40450 1375 aa4.76□□□□□ -1.65
CMS1YLR003C MDM10P18409 493 aa4.75□□□□□ -1.65
CMS1YLR003C PPZ2P33329 710 aa4.75□□□□□ -1.65
CMS1YLR003C PPS1P38148 807 aa4.75□□□□□ -1.65
CMS1YLR003C IMO32P53219 342 aa4.75□□□□□ -1.65
CMS1YLR003C FRE5Q08908 694 aa4.75□□□□□ -1.65
CMS1YLR003C SUT2Q12286 268 aa4.75□□□□□ -1.65
CMS1YLR003C GFA1P14742 717 aaKnown RBP4.74□□□□□ -1.65
CMS1YLR003C SNF7P39929 240 aaKnown RBP4.74□□□□□ -1.65
CMS1YLR003C RAI1P53063 387 aaKnown RBP4.74□□□□□ -1.65
CMS1YLR003C EEB1Q02891 456 aa4.74□□□□□ -1.65
CMS1YLR003C YAP7Q08182 245 aa4.74□□□□□ -1.65
CMS1YLR003C PEX19Q07418 342 aa4.73□□□□□ -1.65
CMS1YLR003C YNL162W-AQ3E7A8 72 aa4.73□□□□□ -1.65
CMS1YLR003C MET3P08536 511 aa4.72□□□□□ -1.65
CMS1YLR003C DUT1P33317 147 aa4.72□□□□□ -1.65
CMS1YLR003C TDP1P38319 544 aa4.72□□□□□ -1.65
CMS1YLR003C SRP1Q02821 542 aaKnown RBP4.72□□□□□ -1.65
CMS1YLR003C SEN54Q02825 467 aaPredicted RBP4.72□□□□□ -1.65
CMS1YLR003C TUB1P09733 447 aaKnown RBP4.71□□□□□ -1.66
CMS1YLR003C RIX1P38883 763 aaPredicted RBP4.71□□□□□ -1.66
CMS1YLR003C FYV10P40492 516 aa4.71□□□□□ -1.66
CMS1YLR003C DLT1Q04216 342 aa4.71□□□□□ -1.66
CMS1YLR003C YPR196WQ06595 470 aa4.71□□□□□ -1.66
CMS1YLR003C SEC21P32074 935 aaKnown RBP4.7□□□□□ -1.66
CMS1YLR003C CDC12P32468 407 aaKnown RBP4.7□□□□□ -1.66
CMS1YLR003C CTF13P35203 478 aa4.7□□□□□ -1.66
CMS1YLR003C YJR107WP47145 328 aa4.7□□□□□ -1.66
CMS1YLR003C SPO20Q04359 397 aa4.7□□□□□ -1.66
CMS1YLR003C ILV6P25605 309 aaKnown RBP4.69□□□□□ -1.66
CMS1YLR003C SLD2P34252 453 aa4.69□□□□□ -1.66
CMS1YLR003C ELO3P40319 345 aa4.69□□□□□ -1.66
CMS1YLR003C POL32P47110 350 aa4.69□□□□□ -1.66
CMS1YLR003C GYP7P48365 746 aa4.69□□□□□ -1.66
CMS1YLR003C YLR225CQ05948 407 aaKnown RBP4.69□□□□□ -1.66
CMS1YLR003C ADY4Q05955 493 aa4.69□□□□□ -1.66
CMS1YLR003C HCA4P20448 770 aaKnown RBP4.68□□□□□ -1.66
CMS1YLR003C TMT1P32643 299 aa4.68□□□□□ -1.66
CMS1YLR003C PIN4P34217 668 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
CMS1YLR003C TAH11P47112 604 aa4.68□□□□□ -1.66
CMS1YLR003C CDC34P14682 295 aa4.67□□□□□ -1.66
CMS1YLR003C VPS73P53142 486 aaKnown RBP4.67□□□□□ -1.66
CMS1YLR003C TRM11Q12463 433 aa4.67□□□□□ -1.66
CMS1YLR003C CDC43P18898 376 aa4.66□□□□□ -1.66
CMS1YLR003C FLO10P36170 1169 aa4.66□□□□□ -1.66
CMS1YLR003C RMD1Q03441 430 aa4.66□□□□□ -1.66
CMS1YLR003C NOT3P06102 836 aaKnown RBP4.65□□□□□ -1.67
CMS1YLR003C CAF20P12962 161 aaKnown RBP4.65□□□□□ -1.67
CMS1YLR003C ATE1P16639 503 aa4.65□□□□□ -1.67
CMS1YLR003C YKR078WP36158 585 aaKnown RBP4.65□□□□□ -1.67
CMS1YLR003C MET10P39692 1035 aa4.65□□□□□ -1.67
CMS1YLR003C SSL1Q04673 461 aaPredicted RBP4.65□□□□□ -1.67
CMS1YLR003C SDP1P40479 209 aa4.64□□□□□ -1.67
CMS1YLR003C SEC5P89102 971 aa4.64□□□□□ -1.67
CMS1YLR003C FBP1P09201 348 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 107.2 ms