RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
CDC6	YJL194W	YIL165C	P40446	119 aa		4.88	□□□□□ -1.63
CDC6	YJL194W	SEC26	P41810	973 aa	Known RBP	4.88	□□□□□ -1.63
CDC6	YJL194W	BNA1	P47096	177 aa		4.88	□□□□□ -1.63
CDC6	YJL194W	ADE12	P80210	433 aa	Known RBP	4.88	□□□□□ -1.63
CDC6	YJL194W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
CDC6	YJL194W	YDR341C	Q05506	607 aa	Known RBP	4.88	□□□□□ -1.63
CDC6	YJL194W	TIF6	Q12522	245 aa	Known RBP	4.88	□□□□□ -1.63
CDC6	YJL194W	SSM4	P40318	1319 aa		4.88	□□□□□ -1.63
CDC6	YJL194W	SES1	P07284	462 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	FUN30	P31380	1131 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	STO1	P34160	861 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	RRP8	P38961	392 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	POP2	P39008	433 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	SAH1	P39954	449 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	GPP2	P40106	250 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	GPD2	P41911	440 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	YNR040W	P53736	256 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	GTR1	Q00582	310 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	TIM50	Q02776	476 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	RSC2	Q06488	889 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	YTM1	Q12024	460 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	DPH6	Q12429	685 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	RMP1	Q12530	201 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	MKK2	P32491	506 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	NOP4	P37838	685 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	BCD1	P38772	366 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	JJJ3	P47138	172 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	TY1A-DR2	Q03964	440 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	EMG1	Q06287	252 aa	Known RBP	4.87	□□□□□ -1.63
CDC6	YJL194W	SDH5	Q08230	162 aa		4.87	□□□□□ -1.63
CDC6	YJL194W	RAD18	P10862	487 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	RAD53	P22216	821 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	ECM32	P32644	1121 aa	Known RBP	4.86	□□□□□ -1.63
CDC6	YJL194W	BEM3	P32873	1128 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CDC6	YJL194W	SRP72	P38688	640 aa	Known RBP	4.86	□□□□□ -1.63
CDC6	YJL194W	RVS167	P39743	482 aa	Known RBP	4.86	□□□□□ -1.63
CDC6	YJL194W	MXR1	P40029	184 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	NIT2	P47016	307 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	NSE5	Q03718	556 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	YLR287C	Q05881	355 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	LAP2	Q10740	671 aa		4.86	□□□□□ -1.63
CDC6	YJL194W	NAT1	P12945	854 aa	Known RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	TPM1	P17536	199 aa	Known RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	DOM34	P33309	386 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	DEF1	P35732	738 aa	Known RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	PSY4	P38193	441 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	RKM3	P38222	552 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	UBS1	P38290	277 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	SEC27	P41811	889 aa	Known RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	RET2	P43621	546 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	YGR035C	P53222	116 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	MEP3	P53390	489 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	RRG1	Q12167	365 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	SCM3	Q12334	223 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	HBN1	Q96VH4	193 aa		4.85	□□□□□ -1.63
CDC6	YJL194W	HSH49	Q99181	213 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC6	YJL194W	STF1	P01098	86 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	SRD1	P09007	221 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	INO1	P11986	533 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	SUI2	P20459	304 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	RET1	P22276	1149 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	SEG2	P34250	1132 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	RER2	P35196	286 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	CKB2	P38930	258 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	CCT3	P39077	534 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	OAF1	P39720	1047 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	EMP65	P40085	556 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	ERR3	P42222	437 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	YJR096W	P47137	282 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	MET13	P53128	600 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	NPY1	P53164	384 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	RBG2	P53295	368 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	RAT1	Q02792	1006 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	TRS130	Q03660	1102 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	HPF1	Q05164	967 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	YDR286C	Q05530	114 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	HEL2	Q05580	639 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	BLS1	Q06071	122 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	YLR257W	Q06146	321 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	RRP9	Q06506	573 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	GUD1	Q07729	489 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	MDM38	Q08179	573 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	SGT2	Q12118	346 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	NOP58	Q12499	511 aa	Known RBP	4.84	□□□□□ -1.63
CDC6	YJL194W	SMC6	Q12749	1114 aa		4.84	□□□□□ -1.63
CDC6	YJL194W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CDC6	YJL194W	SKI3	P17883	1432 aa	Known RBP	4.83	□□□□□ -1.64
CDC6	YJL194W	SFL1	P20134	766 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CDC6	YJL194W	SPC29	P33419	253 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	YEL1	P34225	687 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	YKL107W	P34251	309 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	MCM7	P38132	845 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	YBR284W	P38150	797 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	BIT2	P38346	545 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	RAD26	P40352	1085 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	PRK1	P40494	810 aa		4.83	□□□□□ -1.64
CDC6	YJL194W	GZF3	P42944	551 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms