RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C TSR4P25040 408 aa3.72□□□□□ -1.81
YIR040CYIR040C BRF1P29056 596 aa3.72□□□□□ -1.81
YIR040CYIR040C PIM1P36775 1133 aa3.72□□□□□ -1.81
YIR040CYIR040C PIK1P39104 1066 aa3.72□□□□□ -1.81
YIR040CYIR040C MXR1P40029 184 aa3.72□□□□□ -1.81
YIR040CYIR040C CCM1P48237 864 aaPredicted RBP3.72□□□□□ -1.81
YIR040CYIR040C TYW3P53177 273 aa3.72□□□□□ -1.81
YIR040CYIR040C MDM1Q01846 1127 aa3.72□□□□□ -1.81
YIR040CYIR040C VMS1Q04311 632 aaKnown RBP3.72□□□□□ -1.81
YIR040CYIR040C YLR225CQ05948 407 aaKnown RBP3.72□□□□□ -1.81
YIR040CYIR040C YOR389WQ08912 624 aa3.72□□□□□ -1.81
YIR040CYIR040C PIN2Q12057 282 aa3.72□□□□□ -1.81
YIR040CYIR040C LSP1Q12230 341 aaKnown RBP3.72□□□□□ -1.81
YIR040CYIR040C YRM1Q12340 786 aa3.72□□□□□ -1.81
YIR040CYIR040C SPS1P08458 490 aa3.71□□□□□ -1.82
YIR040CYIR040C SSB1P11484 613 aaKnown RBP3.71□□□□□ -1.82
YIR040CYIR040C DEP1P31385 405 aa3.71□□□□□ -1.82
YIR040CYIR040C PEX5P35056 612 aa3.71□□□□□ -1.82
YIR040CYIR040C SSB2P40150 613 aaKnown RBP3.71□□□□□ -1.82
YIR040CYIR040C BFA1P47113 574 aa3.71□□□□□ -1.82
YIR040CYIR040C SRP1Q02821 542 aaKnown RBP3.71□□□□□ -1.82
YIR040CYIR040C GNT1Q12096 491 aa3.71□□□□□ -1.82
YIR040CYIR040C NKP1Q12493 238 aa3.71□□□□□ -1.82
YIR040CYIR040C VPS5Q92331 675 aa3.71□□□□□ -1.82
YIR040CYIR040C CYB2P00175 591 aa3.7□□□□□ -1.82
YIR040CYIR040C RPL11AP0C0W9 174 aaKnown RBP3.7□□□□□ -1.82
YIR040CYIR040C PPH3P32345 308 aa3.7□□□□□ -1.82
YIR040CYIR040C PPG1P32838 368 aa3.7□□□□□ -1.82
YIR040CYIR040C CCZ1P38273 704 aa3.7□□□□□ -1.82
YIR040CYIR040C PNT1P38969 423 aa3.7□□□□□ -1.82
YIR040CYIR040C SIP5P40210 489 aaKnown RBP3.7□□□□□ -1.82
YIR040CYIR040C FAF1P40546 346 aaPredicted RBP3.7□□□□□ -1.82
YIR040CYIR040C IRC24P40580 263 aa3.7□□□□□ -1.82
YIR040CYIR040C MAD1P40957 749 aa3.7□□□□□ -1.82
YIR040CYIR040C GPI8P49018 411 aa3.7□□□□□ -1.82
YIR040CYIR040C CTF4Q01454 927 aa3.7□□□□□ -1.82
YIR040CYIR040C SVF1Q05515 481 aa3.7□□□□□ -1.82
YIR040CYIR040C RPN7Q06103 429 aaKnown RBP3.7□□□□□ -1.82
YIR040CYIR040C NBA1Q08229 501 aaKnown RBP3.7□□□□□ -1.82
YIR040CYIR040C RPL11BQ3E757 174 aaPredicted RBP3.7□□□□□ -1.82
YIR040CYIR040C CDC31P06704 161 aaKnown RBP3.69□□□□□ -1.82
YIR040CYIR040C SWI6P09959 803 aa3.69□□□□□ -1.82
YIR040CYIR040C SRP54P20424 541 aaKnown RBP3.69□□□□□ -1.82
YIR040CYIR040C CLN1P20437 546 aa3.69□□□□□ -1.82
YIR040CYIR040C BAS1P22035 811 aa3.69□□□□□ -1.82
YIR040CYIR040C ABD1P32783 436 aaPredicted RBP3.69□□□□□ -1.82
YIR040CYIR040C YKL069WP36088 180 aa3.69□□□□□ -1.82
YIR040CYIR040C MAL31P38156 614 aa3.69□□□□□ -1.82
YIR040CYIR040C CHZ1P40019 153 aaPredicted RBP3.69□□□□□ -1.82
YIR040CYIR040C RSC8P43609 557 aaKnown RBP3.69□□□□□ -1.82
YIR040CYIR040C YGL176CP46945 554 aa3.69□□□□□ -1.82
YIR040CYIR040C RNH70P53331 553 aa3.69□□□□□ -1.82
YIR040CYIR040C MRPL22P53881 309 aa3.69□□□□□ -1.82
YIR040CYIR040C ERV41Q04651 352 aa3.69□□□□□ -1.82
YIR040CYIR040C RSB1Q08417 382 aa3.69□□□□□ -1.82
YIR040CYIR040C PRI2P20457 528 aa3.68□□□□□ -1.82
YIR040CYIR040C PHO84P25297 587 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C RPC82P32349 654 aa3.68□□□□□ -1.82
YIR040CYIR040C SLA2P33338 968 aa3.68□□□□□ -1.82
YIR040CYIR040C JNM1P36224 373 aa3.68□□□□□ -1.82
YIR040CYIR040C YHR218WP38899 603 aa3.68□□□□□ -1.82
YIR040CYIR040C NIT1P40447 199 aa3.68□□□□□ -1.82
YIR040CYIR040C SEC26P41810 973 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C SET2P46995 733 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C FOL2P51601 243 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C CWC24P53769 259 aa3.68□□□□□ -1.82
YIR040CYIR040C SXM1Q04175 944 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C RRB1Q04225 511 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C PHM6Q05637 104 aa3.68□□□□□ -1.82
YIR040CYIR040C SPP382Q06411 708 aaPredicted RBP3.68□□□□□ -1.82
YIR040CYIR040C YOL057WQ08225 711 aa3.68□□□□□ -1.82
YIR040CYIR040C PCL8Q08966 492 aa3.68□□□□□ -1.82
YIR040CYIR040C RUD3Q12234 484 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C RIB2Q12362 591 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C RKM4Q12504 494 aa3.68□□□□□ -1.82
YIR040CYIR040C NOP14Q99207 810 aaKnown RBP3.68□□□□□ -1.82
YIR040CYIR040C KAR3P17119 729 aa3.67□□□□□ -1.82
YIR040CYIR040C RPB4P20433 221 aaPredicted RBP3.67□□□□□ -1.82
YIR040CYIR040C CLN2P20438 545 aa3.67□□□□□ -1.82
YIR040CYIR040C SRM1P21827 482 aa3.67□□□□□ -1.82
YIR040CYIR040C ARC19P33204 171 aaKnown RBP3.67□□□□□ -1.82
YIR040CYIR040C NIP100P33420 868 aa3.67□□□□□ -1.82
YIR040CYIR040C YKL107WP34251 309 aa3.67□□□□□ -1.82
YIR040CYIR040C THI80P35202 319 aa3.67□□□□□ -1.82
YIR040CYIR040C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
YIR040CYIR040C UGA2P38067 497 aa3.67□□□□□ -1.82
YIR040CYIR040C GRX7P38068 203 aa3.67□□□□□ -1.82
YIR040CYIR040C AIM3P38266 947 aaKnown RBP3.67□□□□□ -1.82
YIR040CYIR040C PET100P38958 111 aa3.67□□□□□ -1.82
YIR040CYIR040C VAC8P39968 578 aa3.67□□□□□ -1.82
YIR040CYIR040C BUD27P43573 796 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
YIR040CYIR040C SMC3P47037 1230 aa3.67□□□□□ -1.82
YIR040CYIR040C JJJ1P53863 590 aa3.67□□□□□ -1.82
YIR040CYIR040C ALD6P54115 500 aaKnown RBP3.67□□□□□ -1.82
YIR040CYIR040C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
YIR040CYIR040C CWC21Q03375 135 aaKnown RBP3.67□□□□□ -1.82
YIR040CYIR040C SPO20Q04359 397 aa3.67□□□□□ -1.82
YIR040CYIR040C ARR1Q06596 294 aa3.67□□□□□ -1.82
YIR040CYIR040C MDM38Q08179 573 aa3.67□□□□□ -1.82
YIR040CYIR040C OPI10Q08202 246 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms