RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C LCB5Q06147 687 aaKnown RBP9.35□□□□□ -0.91
SSL2YIL143C YLR177WQ06251 628 aa9.35□□□□□ -0.91
SSL2YIL143C CMS1Q07897 291 aaKnown RBP9.35□□□□□ -0.91
SSL2YIL143C AIM41Q12032 185 aa9.35□□□□□ -0.91
SSL2YIL143C TUS1Q06412 1307 aa9.34□□□□□ -0.91
SSL2YIL143C TRK2P28584 889 aa9.34□□□□□ -0.91
SSL2YIL143C FOL1P53848 824 aa9.34□□□□□ -0.91
SSL2YIL143C ILV6P25605 309 aaKnown RBP9.34□□□□□ -0.91
SSL2YIL143C YCR051WP25631 222 aa9.34□□□□□ -0.91
SSL2YIL143C PIH1P38768 344 aa9.34□□□□□ -0.91
SSL2YIL143C RIM8P53179 542 aa9.34□□□□□ -0.91
SSL2YIL143C YGR021WP53212 290 aa9.34□□□□□ -0.91
SSL2YIL143C CPR6P53691 371 aaKnown RBP9.34□□□□□ -0.91
SSL2YIL143C SPO21Q12411 609 aa9.34□□□□□ -0.91
SSL2YIL143C SEC14P24280 304 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C SPT5P27692 1063 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C NAM7P30771 971 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C KAP123P40069 1113 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C SAP185P40856 1058 aa9.33□□□□□ -0.92
SSL2YIL143C SEC26P41810 973 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C NBP1P52919 319 aaPredicted RBP9.33□□□□□ -0.92
SSL2YIL143C RIB2Q12362 591 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C TRP2P00899 507 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C KAR3P17119 729 aa9.33□□□□□ -0.92
SSL2YIL143C CHS3P29465 1165 aa9.33□□□□□ -0.92
SSL2YIL143C RAD5P32849 1169 aaPredicted RBP9.33□□□□□ -0.92
SSL2YIL143C YKL023WP36103 277 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C HEK2P38199 381 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SSL2YIL143C RCK2P38623 610 aa9.33□□□□□ -0.92
SSL2YIL143C GSM1P42950 618 aa9.33□□□□□ -0.92
SSL2YIL143C SEC5P89102 971 aa9.33□□□□□ -0.92
SSL2YIL143C GTR1Q00582 310 aa9.33□□□□□ -0.92
SSL2YIL143C TFB2Q02939 513 aa9.33□□□□□ -0.92
SSL2YIL143C YDL057WQ07379 328 aa9.33□□□□□ -0.92
SSL2YIL143C FRA1Q07825 749 aa9.33□□□□□ -0.92
SSL2YIL143C WRS1Q12109 432 aaKnown RBP9.33□□□□□ -0.92
SSL2YIL143C TY4A-HQ6Q5P6 413 aa9.33□□□□□ -0.92
SSL2YIL143C POL3P15436 1097 aa9.32□□□□□ -0.92
SSL2YIL143C NPR2P39923 615 aa9.32□□□□□ -0.92
SSL2YIL143C UBX5Q06682 500 aa9.32□□□□□ -0.92
SSL2YIL143C NOB1Q08444 459 aaKnown RBP9.32□□□□□ -0.92
SSL2YIL143C SEY1Q99287 776 aa9.32□□□□□ -0.92
SSL2YIL143C VAN1P23642 535 aa9.32□□□□□ -0.92
SSL2YIL143C KTR2P33550 425 aa9.32□□□□□ -0.92
SSL2YIL143C GAA1P39012 614 aa9.32□□□□□ -0.92
SSL2YIL143C APL6P46682 809 aa9.32□□□□□ -0.92
SSL2YIL143C BRO1P48582 844 aa9.32□□□□□ -0.92
SSL2YIL143C TCO89Q08921 799 aa9.32□□□□□ -0.92
SSL2YIL143C TAF10Q12030 206 aa9.32□□□□□ -0.92
SSL2YIL143C NCA2Q12374 616 aa9.32□□□□□ -0.92
SSL2YIL143C RPB2P08518 1224 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C LCP5P40079 357 aaPredicted RBP9.31□□□□□ -0.92
SSL2YIL143C TMA22P47089 198 aaPredicted RBP9.31□□□□□ -0.92
SSL2YIL143C HUL5P53119 910 aa9.31□□□□□ -0.92
SSL2YIL143C PGA2P53903 129 aa9.31□□□□□ -0.92
SSL2YIL143C DPL1Q05567 589 aa9.31□□□□□ -0.92
SSL2YIL143C IRC3Q06683 689 aa9.31□□□□□ -0.92
SSL2YIL143C TSR1Q07381 788 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C PSF3Q12146 194 aa9.31□□□□□ -0.92
SSL2YIL143C CLF1Q12309 687 aaPredicted RBP9.31□□□□□ -0.92
SSL2YIL143C PFK1P16861 987 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C RPA135P22138 1203 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C OXP1P28273 1286 aa9.31□□□□□ -0.92
SSL2YIL143C GCD6P32501 712 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C YKL050CP35736 922 aa9.31□□□□□ -0.92
SSL2YIL143C ECM2P38241 364 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C YMR1P47147 688 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
SSL2YIL143C MSN5P52918 1224 aa9.31□□□□□ -0.92
SSL2YIL143C SUE1Q06524 206 aa9.31□□□□□ -0.92
SSL2YIL143C VIP1Q06685 1146 aaKnown RBP9.31□□□□□ -0.92
SSL2YIL143C OXR1Q08952 273 aa9.31□□□□□ -0.92
SSL2YIL143C ACM1Q08981 209 aa9.31□□□□□ -0.92
SSL2YIL143C SRV2P17555 526 aaKnown RBP9.3□□□□□ -0.92
SSL2YIL143C YME2P32843 850 aa9.3□□□□□ -0.92
SSL2YIL143C PMC1P38929 1173 aaPredicted RBP9.3□□□□□ -0.92
SSL2YIL143C GIR2Q03768 265 aaPredicted RBP9.3□□□□□ -0.92
SSL2YIL143C FAR8Q05040 523 aa9.3□□□□□ -0.92
SSL2YIL143C YDR278CQ05612 105 aa9.3□□□□□ -0.92
SSL2YIL143C MPC54Q08550 464 aa9.3□□□□□ -0.92
SSL2YIL143C ILV1P00927 576 aaKnown RBP9.3□□□□□ -0.92
SSL2YIL143C ADH4P10127 382 aa9.3□□□□□ -0.92
SSL2YIL143C PBP2P38151 413 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
SSL2YIL143C PUS6P53294 404 aa9.3□□□□□ -0.92
SSL2YIL143C JJJ1P53863 590 aa9.3□□□□□ -0.92
SSL2YIL143C UTP6Q02354 440 aaKnown RBP9.3□□□□□ -0.92
SSL2YIL143C EEB1Q02891 456 aa9.3□□□□□ -0.92
SSL2YIL143C YMR018WQ04364 514 aa9.3□□□□□ -0.92
SSL2YIL143C SPC24Q04477 213 aa9.3□□□□□ -0.92
SSL2YIL143C TDA9Q04545 1251 aa9.3□□□□□ -0.92
SSL2YIL143C MAG2Q06436 670 aaKnown RBP9.3□□□□□ -0.92
SSL2YIL143C FAL1Q12099 399 aaKnown RBP9.3□□□□□ -0.92
SSL2YIL143C YLR462WO13556 202 aa9.29□□□□□ -0.92
SSL2YIL143C RAD3P06839 778 aa9.29□□□□□ -0.92
SSL2YIL143C GPI10P30777 616 aa9.29□□□□□ -0.92
SSL2YIL143C YHL049CP38722 271 aa9.29□□□□□ -0.92
SSL2YIL143C YEL075CP39972 122 aa9.29□□□□□ -0.92
SSL2YIL143C YER189WP40104 122 aa9.29□□□□□ -0.92
SSL2YIL143C TDA10P42938 290 aa9.29□□□□□ -0.92
SSL2YIL143C YFL064CP43540 174 aa9.29□□□□□ -0.92
SSL2YIL143C BUL2Q03758 920 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms