RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERG9	YHR190W	YKL151C	P36059	337 aa		5.01	□□□□□ -1.61
ERG9	YHR190W	CHA4	P43634	648 aa		5.01	□□□□□ -1.61
ERG9	YHR190W	DUS3	Q06053	668 aa	Known RBP	5.01	□□□□□ -1.61
ERG9	YHR190W	CDC12	P32468	407 aa	Known RBP	5	□□□□□ -1.61
ERG9	YHR190W	SRP101	P32916	621 aa		5	□□□□□ -1.61
ERG9	YHR190W	MRP8	P35719	219 aa		5	□□□□□ -1.61
ERG9	YHR190W	YKR078W	P36158	585 aa	Known RBP	5	□□□□□ -1.61
ERG9	YHR190W	GIC1	P38785	314 aa		5	□□□□□ -1.61
ERG9	YHR190W	ESC2	Q06340	456 aa		5	□□□□□ -1.61
ERG9	YHR190W	YPR196W	Q06595	470 aa		5	□□□□□ -1.61
ERG9	YHR190W	CDA1	Q06702	301 aa		5	□□□□□ -1.61
ERG9	YHR190W	OPI10	Q08202	246 aa		5	□□□□□ -1.61
ERG9	YHR190W	MBP1	P39678	833 aa		4.99	□□□□□ -1.61
ERG9	YHR190W	AIM21	P40563	679 aa		4.99	□□□□□ -1.61
ERG9	YHR190W	ADE8	P04161	214 aa		4.98	□□□□□ -1.61
ERG9	YHR190W	PFK1	P16861	987 aa	Known RBP	4.98	□□□□□ -1.61
ERG9	YHR190W	PPH3	P32345	308 aa		4.98	□□□□□ -1.61
ERG9	YHR190W	VBA5	P36172	582 aa		4.98	□□□□□ -1.61
ERG9	YHR190W	GYP7	P48365	746 aa		4.98	□□□□□ -1.61
ERG9	YHR190W	AIM44	Q99299	758 aa		4.98	□□□□□ -1.61
ERG9	YHR190W	PBY1	P38254	753 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
ERG9	YHR190W	PHO23	P50947	330 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	EXG2	P52911	562 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	YDR306C	Q06640	478 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	AIM39	Q08223	395 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	DEF1	P35732	738 aa	Known RBP	4.97	□□□□□ -1.61
ERG9	YHR190W	YER158C	P40095	573 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	URM1	P40554	99 aa	Predicted RBP	4.97	□□□□□ -1.61
ERG9	YHR190W	VPS30	Q02948	557 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	ENB1	Q08299	606 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	GUP2	Q08929	609 aa		4.97	□□□□□ -1.61
ERG9	YHR190W	PRP9	P19736	530 aa	Known RBP	4.96	□□□□□ -1.62
ERG9	YHR190W	PRI2	P20457	528 aa		4.96	□□□□□ -1.62
ERG9	YHR190W	CDC48	P25694	835 aa	Known RBP	4.96	□□□□□ -1.62
ERG9	YHR190W	AAR2	P32357	355 aa	Predicted RBP	4.96	□□□□□ -1.62
ERG9	YHR190W	IRR1	P40541	1150 aa		4.96	□□□□□ -1.62
ERG9	YHR190W	SUN4	P53616	420 aa		4.96	□□□□□ -1.62
ERG9	YHR190W	NPC2	Q12408	173 aa		4.96	□□□□□ -1.62
ERG9	YHR190W	KCS1	Q12494	1050 aa		4.96	□□□□□ -1.62
ERG9	YHR190W	VAC8	P39968	578 aa		4.95	□□□□□ -1.62
ERG9	YHR190W	RAI1	P53063	387 aa	Known RBP	4.95	□□□□□ -1.62
ERG9	YHR190W	SFB2	P53953	876 aa		4.95	□□□□□ -1.62
ERG9	YHR190W	CTF4	Q01454	927 aa		4.95	□□□□□ -1.62
ERG9	YHR190W	IOC4	Q04213	475 aa		4.95	□□□□□ -1.62
ERG9	YHR190W	NCS6	P53088	359 aa		4.94	□□□□□ -1.62
ERG9	YHR190W	SED4	P25365	1065 aa		4.93	□□□□□ -1.62
ERG9	YHR190W	MSS4	P38994	779 aa		4.93	□□□□□ -1.62
ERG9	YHR190W	HRR25	P29295	494 aa	Known RBP	4.92	□□□□□ -1.62
ERG9	YHR190W	CDC11	P32458	415 aa		4.92	□□□□□ -1.62
ERG9	YHR190W	YKL069W	P36088	180 aa		4.92	□□□□□ -1.62
ERG9	YHR190W	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
ERG9	YHR190W	SIT1	P39980	628 aa		4.92	□□□□□ -1.62
ERG9	YHR190W	NPP2	P39997	493 aa		4.92	□□□□□ -1.62
ERG9	YHR190W	CCM1	P48237	864 aa	Predicted RBP	4.92	□□□□□ -1.62
ERG9	YHR190W	ALD6	P54115	500 aa	Known RBP	4.92	□□□□□ -1.62
ERG9	YHR190W	TDA5	Q06417	326 aa	Known RBP	4.92	□□□□□ -1.62
ERG9	YHR190W	CAD1	P24813	409 aa	Known RBP	4.91	□□□□□ -1.62
ERG9	YHR190W	YRO2	P38079	344 aa		4.91	□□□□□ -1.62
ERG9	YHR190W	YBR238C	P38330	731 aa	Known RBP	4.91	□□□□□ -1.62
ERG9	YHR190W	WRS1	Q12109	432 aa	Known RBP	4.91	□□□□□ -1.62
ERG9	YHR190W	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
ERG9	YHR190W	RFA1	P22336	621 aa	Known RBP	4.9	□□□□□ -1.63
ERG9	YHR190W	SPF1	P39986	1215 aa	Known RBP	4.9	□□□□□ -1.63
ERG9	YHR190W	KIN4	Q01919	800 aa		4.9	□□□□□ -1.63
ERG9	YHR190W	KAR4	P25583	335 aa		4.89	□□□□□ -1.63
ERG9	YHR190W	EFT1	P32324	842 aa	Known RBP	4.89	□□□□□ -1.63
ERG9	YHR190W	YKE2	P52553	114 aa		4.89	□□□□□ -1.63
ERG9	YHR190W	LCD1	Q04377	747 aa		4.89	□□□□□ -1.63
ERG9	YHR190W	WHI4	Q07655	649 aa	Known RBP	4.89	□□□□□ -1.63
ERG9	YHR190W	SPO75	Q07798	868 aa		4.89	□□□□□ -1.63
ERG9	YHR190W	UPC2	Q12151	913 aa		4.89	□□□□□ -1.63
ERG9	YHR190W	STE13	P33894	931 aa		4.88	□□□□□ -1.63
ERG9	YHR190W	KTR4	P38131	464 aa		4.88	□□□□□ -1.63
ERG9	YHR190W	CHS7	P38843	316 aa		4.88	□□□□□ -1.63
ERG9	YHR190W	GIS1	Q03833	894 aa		4.88	□□□□□ -1.63
ERG9	YHR190W	TAD3	Q9URQ3	322 aa		4.88	□□□□□ -1.63
ERG9	YHR190W	NPP1	P25353	742 aa		4.86	□□□□□ -1.63
ERG9	YHR190W	REC104	P33323	182 aa		4.86	□□□□□ -1.63
ERG9	YHR190W	YBR184W	P38299	523 aa		4.86	□□□□□ -1.63
ERG9	YHR190W	SLI1	P53304	468 aa		4.86	□□□□□ -1.63
ERG9	YHR190W	TRP4	P07285	380 aa	Predicted RBP	4.85	□□□□□ -1.63
ERG9	YHR190W	RAD53	P22216	821 aa		4.85	□□□□□ -1.63
ERG9	YHR190W	TYE7	P33122	291 aa	Predicted RBP	4.85	□□□□□ -1.63
ERG9	YHR190W	OAR1	P35731	278 aa		4.85	□□□□□ -1.63
ERG9	YHR190W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
ERG9	YHR190W	ERP6	P53198	216 aa		4.85	□□□□□ -1.63
ERG9	YHR190W	NAN1	Q02931	896 aa	Known RBP	4.85	□□□□□ -1.63
ERG9	YHR190W	PAM1	P37304	830 aa	Known RBP	4.84	□□□□□ -1.63
ERG9	YHR190W	SUL1	P38359	859 aa		4.84	□□□□□ -1.63
ERG9	YHR190W	ALR2	P43553	858 aa		4.84	□□□□□ -1.63
ERG9	YHR190W	UBA2	P52488	636 aa		4.84	□□□□□ -1.63
ERG9	YHR190W	UTP8	P53276	713 aa	Known RBP	4.84	□□□□□ -1.63
ERG9	YHR190W	OSH2	Q12451	1283 aa		4.84	□□□□□ -1.63
ERG9	YHR190W	RPS9A	O13516	197 aa	Known RBP	4.83	□□□□□ -1.64
ERG9	YHR190W	GRX1	P25373	110 aa	Known RBP	4.83	□□□□□ -1.64
ERG9	YHR190W	STE14	P32584	239 aa		4.83	□□□□□ -1.64
ERG9	YHR190W	HBS1	P32769	611 aa	Known RBP	4.83	□□□□□ -1.64
ERG9	YHR190W	STE5	P32917	917 aa		4.83	□□□□□ -1.64
ERG9	YHR190W	AFR1	P33304	620 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms