RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	GAL11	P19659	1081 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	PRD1	P25375	712 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	MRT4	P33201	236 aa	Known RBP	4.91	□□□□□ -1.62
YGL088W	YGL088W	TGL1	P34163	548 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	DRE2	P36152	348 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	YFL052W	P43551	465 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	RSM26	P47141	266 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	SFB2	P53953	876 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
YGL088W	YGL088W	RAD2	P07276	1031 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	ADK2	P26364	225 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	SEC21	P32074	935 aa	Known RBP	4.9	□□□□□ -1.63
YGL088W	YGL088W	MSS51	P32335	436 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	ECM32	P32644	1121 aa	Known RBP	4.9	□□□□□ -1.63
YGL088W	YGL088W	SLD2	P34252	453 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	SAF1	P38352	637 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	OCA5	P38738	679 aa		4.9	□□□□□ -1.63
YGL088W	YGL088W	PKH3	Q03306	898 aa	Predicted RBP	4.9	□□□□□ -1.63
YGL088W	YGL088W	TMA64	Q04600	565 aa	Known RBP	4.9	□□□□□ -1.63
YGL088W	YGL088W	TAF13	P11747	167 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	DAL5	P15365	543 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	VAC17	P25591	423 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	CSE1	P33307	960 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	RFS1	P38234	210 aa	Known RBP	4.89	□□□□□ -1.63
YGL088W	YGL088W	RIM4	P38741	713 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	PES4	P39684	611 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	YER158C	P40095	573 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	RPS7B	P48164	190 aa	Known RBP	4.89	□□□□□ -1.63
YGL088W	YGL088W	ALT2	P52892	507 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	STP1	Q00947	519 aa		4.89	□□□□□ -1.63
YGL088W	YGL088W	GIR2	Q03768	265 aa	Predicted RBP	4.89	□□□□□ -1.63
YGL088W	YGL088W	MOT1	P32333	1867 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	HMG2	P12684	1045 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	ACE2	P21192	770 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	MSH2	P25847	964 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	DID4	P36108	232 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	PPE1	P38796	400 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	ESL1	P40456	1118 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	HOS4	P40480	1083 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	ZAP1	P47043	880 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	RRP46	P53256	223 aa	Predicted RBP	4.88	□□□□□ -1.63
YGL088W	YGL088W	YGR130C	P53278	816 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	CUS1	Q02554	436 aa	Predicted RBP	4.88	□□□□□ -1.63
YGL088W	YGL088W	SRT1	Q03175	343 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	NSE5	Q03718	556 aa		4.88	□□□□□ -1.63
YGL088W	YGL088W	FPR4	Q06205	392 aa	Predicted RBP	4.88	□□□□□ -1.63
YGL088W	YGL088W	CET1	O13297	549 aa	Predicted RBP	4.87	□□□□□ -1.63
YGL088W	YGL088W	RPS14A	P06367	137 aa	Known RBP	4.87	□□□□□ -1.63
YGL088W	YGL088W	SAM2	P19358	384 aa	Known RBP	4.87	□□□□□ -1.63
YGL088W	YGL088W	RRN6	P32786	894 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	TOM20	P35180	183 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	RPS14B	P39516	138 aa	Known RBP	4.87	□□□□□ -1.63
YGL088W	YGL088W	SDS3	P40505	327 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	YIR016W	P40572	265 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	MAF1	P41910	395 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	LSB6	P42951	607 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	TAF1	P46677	1066 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	CSN12	P47130	423 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	GCV2	P49095	1034 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	HUL5	P53119	910 aa		4.87	□□□□□ -1.63
YGL088W	YGL088W	LEE1	Q02799	301 aa	Known RBP	4.87	□□□□□ -1.63
YGL088W	YGL088W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YGL088W	YGL088W	PEX1	P24004	1043 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	SWC3	P31376	625 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	SFP1	P32432	683 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	LEU5	P38702	357 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	NMD2	P38798	1089 aa	Known RBP	4.86	□□□□□ -1.63
YGL088W	YGL088W	UBP15	P50101	1230 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	PSP2	P50109	593 aa	Known RBP	4.86	□□□□□ -1.63
YGL088W	YGL088W	VIP1	Q06685	1146 aa	Known RBP	4.86	□□□□□ -1.63
YGL088W	YGL088W	OSH2	Q12451	1283 aa		4.86	□□□□□ -1.63
YGL088W	YGL088W	RPA135	P22138	1203 aa	Known RBP	4.85	□□□□□ -1.63
YGL088W	YGL088W	SEC20	P28791	383 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	CHS3	P29465	1165 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	MPE1	P35728	441 aa	Known RBP	4.85	□□□□□ -1.63
YGL088W	YGL088W	MIC60	P36112	540 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	GRX7	P38068	203 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	VPS8	P39702	1274 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	YNL193W	P53870	558 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	YNL134C	P53912	376 aa	Known RBP	4.85	□□□□□ -1.63
YGL088W	YGL088W	YAT1	P80235	687 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	MRI1	Q06489	411 aa	Known RBP	4.85	□□□□□ -1.63
YGL088W	YGL088W	OPT2	Q06593	877 aa		4.85	□□□□□ -1.63
YGL088W	YGL088W	QCR6	P00127	147 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	YHR202W	P38887	602 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	PMC1	P38929	1173 aa	Predicted RBP	4.84	□□□□□ -1.63
YGL088W	YGL088W	VPS45	P38932	577 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	FIG4	P42837	879 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	ENP2	P48234	707 aa	Known RBP	4.84	□□□□□ -1.63
YGL088W	YGL088W	LIF1	P53150	421 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	MDR1	P53258	950 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	LSB1	P53281	241 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	YNR061C	P53747	219 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	CSL4	P53859	292 aa	Predicted RBP	4.84	□□□□□ -1.63
YGL088W	YGL088W	MEH1	Q02205	184 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	YDL121C	Q07541	149 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	PSK2	Q08217	1101 aa		4.84	□□□□□ -1.63
YGL088W	YGL088W	RNA1	P11745	407 aa	Known RBP	4.83	□□□□□ -1.64
YGL088W	YGL088W	PCF11	P39081	626 aa	Predicted RBP	4.83	□□□□□ -1.64
YGL088W	YGL088W	ERP2	P39704	215 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms