RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	NCA2	Q12374	616 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	VPS5	Q92331	675 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	SSE1	P32589	693 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	MIP6	P38760	659 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	RTS1	P38903	757 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	VFA1	P40080	203 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	SQS1	P53866	767 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	PPM1	Q04081	328 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	TMA64	Q04600	565 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	ESF1	Q06344	628 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	TSR2	Q06672	205 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	APL1	P27351	700 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	HXT1	P32465	570 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	NUP133	P36161	1157 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	PIM1	P36775	1133 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	OSH3	P38713	996 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	CCM1	P48237	864 aa	Predicted RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	YGR237C	P50089	785 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	RPT6	Q01939	405 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	MUB1	Q03162	620 aa		5.82	□□□□□ -1.48
VTC2	YFL004W	YMR114C	Q04471	368 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	UTP4	Q06679	776 aa	Known RBP	5.82	□□□□□ -1.48
VTC2	YFL004W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.82	□□□□□ -1.48	not detected
VTC2	YFL004W	TY4B-H	P0C2J7	1802 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	TY4B-J	P47024	1803 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	YPR089W	O13585	888 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	ENO1	P00924	437 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	ADH4	P10127	382 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	GFA1	P14742	717 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	IMP2'	P32351	346 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	SLA2	P33338	968 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	DBP7	P36120	742 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	PRP43	P53131	767 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	YGR273C	P53329	174 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	PKH3	Q03306	898 aa	Predicted RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	EBS1	Q03466	884 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	SPO71	Q03868	1245 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	RSM24	Q03976	319 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	NSE1	Q07913	336 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	VIK1	Q12045	647 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	HSC82	P15108	705 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	VMA4	P22203	233 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	ILV6	P25605	309 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	FES1	P38260	290 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	YNL320W	P42840	284 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	LSG1	P53145	640 aa	Known RBP	5.81	□□□□□ -1.48
VTC2	YFL004W	ATG26	Q06321	1198 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	ATG17	Q06410	417 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	BUD7	Q08754	746 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	GPR1	Q12361	961 aa		5.81	□□□□□ -1.48
VTC2	YFL004W	YIL177C	P40434	1758 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	YJL225C	P40889	1758 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	CBP3	P21560	335 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	PKC1	P24583	1151 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	PDC6	P26263	563 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	KIP1	P28742	1111 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	UBC6	P33296	250 aa	Predicted RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
VTC2	YFL004W	SIP5	P40210	489 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	URB2	P47108	1174 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	IMD4	P50094	524 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	FAR11	P53917	953 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	YML108W	Q03759	105 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	VPS64	Q03944	604 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	RIO1	Q12196	484 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	CLF1	Q12309	687 aa	Predicted RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	PPR1	P07272	904 aa	Predicted RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	DPB2	P24482	689 aa	Predicted RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	BMH1	P29311	267 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	UGA2	P38067	497 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	SOL3	P38858	249 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	UBP12	P39538	1254 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	LSC2	P53312	427 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	OPY2	Q06810	360 aa		5.8	□□□□□ -1.48
VTC2	YFL004W	NOP12	Q08208	459 aa	Known RBP	5.8	□□□□□ -1.48
VTC2	YFL004W	SRV2	P17555	526 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	HCA4	P20448	770 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	SEC20	P28791	383 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	NAM7	P30771	971 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	BCD1	P38772	366 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	SMX2	P40204	77 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	PDS1	P40316	373 aa	Predicted RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	AIM21	P40563	679 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	IES1	P43579	692 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	STB2	P46679	850 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	HOP2	P53187	214 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	SDA1	P53313	767 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	CFT2	Q12102	859 aa	Predicted RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	POM152	P39685	1337 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	TUS1	Q06412	1307 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	MSB1	P21339	1137 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	GEF1	P37020	779 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	BOI1	P38041	980 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	RPN10	P38886	268 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	YEL023C	P39992	682 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	AIP1	P46680	615 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	YJL007C	P47080	104 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	COS6	P53344	381 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	ESF2	P53743	316 aa	Known RBP	5.79	□□□□□ -1.48
VTC2	YFL004W	YNL040W	P53960	456 aa	Predicted RBP	5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 82.9 ms