RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C GYP7P48365 746 aa3.83□□□□□ -1.8
MSH4YFL003C YLL054CQ12244 843 aa3.83□□□□□ -1.8
MSH4YFL003C YCL002CP25565 263 aa3.82□□□□□ -1.8
MSH4YFL003C PMC1P38929 1173 aaPredicted RBP3.82□□□□□ -1.8
MSH4YFL003C PEX7P39108 375 aa3.82□□□□□ -1.8
MSH4YFL003C HFM1P51979 1187 aa3.82□□□□□ -1.8
MSH4YFL003C YLL058WQ12198 575 aa3.82□□□□□ -1.8
MSH4YFL003C ADE8P04161 214 aa3.82□□□□□ -1.8
MSH4YFL003C RAD18P10862 487 aa3.82□□□□□ -1.8
MSH4YFL003C PPH3P32345 308 aa3.82□□□□□ -1.8
MSH4YFL003C YBR071WP38243 211 aa3.82□□□□□ -1.8
MSH4YFL003C BOI2P39969 1040 aa3.82□□□□□ -1.8
MSH4YFL003C HLJ1P48353 224 aa3.82□□□□□ -1.8
MSH4YFL003C TDA6Q06466 467 aa3.82□□□□□ -1.8
MSH4YFL003C YOR378WQ08902 515 aa3.82□□□□□ -1.8
MSH4YFL003C TRK2P28584 889 aa3.81□□□□□ -1.8
MSH4YFL003C HSE1P38753 452 aa3.81□□□□□ -1.8
MSH4YFL003C SNF7P39929 240 aaKnown RBP3.81□□□□□ -1.8
MSH4YFL003C OYE3P41816 400 aaPredicted RBP3.81□□□□□ -1.8
MSH4YFL003C AIM14P53109 570 aa3.81□□□□□ -1.8
MSH4YFL003C ALO1P54783 526 aaKnown RBP3.81□□□□□ -1.8
MSH4YFL003C LRS4Q04087 347 aaKnown RBP3.81□□□□□ -1.8
MSH4YFL003C MRC1P25588 1096 aa3.81□□□□□ -1.8
MSH4YFL003C SFP1P32432 683 aa3.81□□□□□ -1.8
MSH4YFL003C PGM1P33401 570 aaKnown RBP3.81□□□□□ -1.8
MSH4YFL003C EMC3P36039 253 aa3.81□□□□□ -1.8
MSH4YFL003C YJR096WP47137 282 aa3.81□□□□□ -1.8
MSH4YFL003C SDA1P53313 767 aaKnown RBP3.81□□□□□ -1.8
MSH4YFL003C ATG33Q06485 197 aa3.81□□□□□ -1.8
MSH4YFL003C YDR215CQ12240 137 aa3.81□□□□□ -1.8
MSH4YFL003C PIF1P07271 859 aa3.8□□□□□ -1.8
MSH4YFL003C PER1P25625 357 aa3.8□□□□□ -1.8
MSH4YFL003C DAL3P32459 195 aa3.8□□□□□ -1.8
MSH4YFL003C SWE1P32944 819 aa3.8□□□□□ -1.8
MSH4YFL003C PMT3P47190 753 aa3.8□□□□□ -1.8
MSH4YFL003C YNL034WP53963 612 aa3.8□□□□□ -1.8
MSH4YFL003C YNL018CP53976 612 aa3.8□□□□□ -1.8
MSH4YFL003C MET7Q08645 548 aa3.8□□□□□ -1.8
MSH4YFL003C YBR182C-AQ8TGU6 64 aa3.8□□□□□ -1.8
MSH4YFL003C YKR078WP36158 585 aaKnown RBP3.8□□□□□ -1.8
MSH4YFL003C MCX1P38323 520 aaPredicted RBP3.8□□□□□ -1.8
MSH4YFL003C TPM2P40414 161 aa3.8□□□□□ -1.8
MSH4YFL003C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
MSH4YFL003C HDA1P53973 706 aa3.8□□□□□ -1.8
MSH4YFL003C SRP1Q02821 542 aaKnown RBP3.8□□□□□ -1.8
MSH4YFL003C PLC1P32383 869 aa3.79□□□□□ -1.8
MSH4YFL003C ATG14P38270 344 aa3.79□□□□□ -1.8
MSH4YFL003C ARI1P53111 347 aaKnown RBP3.79□□□□□ -1.8
MSH4YFL003C SDH1Q00711 640 aa3.79□□□□□ -1.8
MSH4YFL003C SND1Q04007 877 aa3.79□□□□□ -1.8
MSH4YFL003C HMG1P12683 1054 aa3.79□□□□□ -1.8
MSH4YFL003C CCR4P31384 837 aaKnown RBP3.79□□□□□ -1.8
MSH4YFL003C WHI3P34761 661 aaKnown RBP3.79□□□□□ -1.8
MSH4YFL003C YAP1801P38856 637 aa3.79□□□□□ -1.8
MSH4YFL003C PIK1P39104 1066 aa3.79□□□□□ -1.8
MSH4YFL003C TAD1P53065 400 aa3.79□□□□□ -1.8
MSH4YFL003C TNA1P53322 534 aa3.79□□□□□ -1.8
MSH4YFL003C HRK1Q08732 759 aaKnown RBP3.79□□□□□ -1.8
MSH4YFL003C YEL1P34225 687 aa3.78□□□□□ -1.8
MSH4YFL003C ECM21P38167 1117 aaKnown RBP3.78□□□□□ -1.8
MSH4YFL003C HXT6P39003 570 aaKnown RBP3.78□□□□□ -1.8
MSH4YFL003C HXT7P39004 570 aa3.78□□□□□ -1.8
MSH4YFL003C CCM1P48237 864 aaPredicted RBP3.78□□□□□ -1.8
MSH4YFL003C FBP1P09201 348 aa3.78□□□□□ -1.8
MSH4YFL003C HOG1P32485 435 aa3.78□□□□□ -1.8
MSH4YFL003C SEC6P32844 805 aa3.78□□□□□ -1.8
MSH4YFL003C OAF1P39720 1047 aaPredicted RBP3.78□□□□□ -1.8
MSH4YFL003C YER158CP40095 573 aa3.78□□□□□ -1.8
MSH4YFL003C RSC58Q07979 502 aa3.78□□□□□ -1.8
MSH4YFL003C MCA1Q08601 432 aa3.78□□□□□ -1.8
MSH4YFL003C GPR1Q12361 961 aa3.78□□□□□ -1.8
MSH4YFL003C CDC48P25694 835 aaKnown RBP3.77□□□□□ -1.81
MSH4YFL003C GPP2P40106 250 aaKnown RBP3.77□□□□□ -1.81
MSH4YFL003C RRT14P40470 206 aa3.77□□□□□ -1.81
MSH4YFL003C YGR035CP53222 116 aa3.77□□□□□ -1.81
MSH4YFL003C YNR014WP53719 212 aa3.77□□□□□ -1.81
MSH4YFL003C SUB1P54000 292 aaKnown RBP3.77□□□□□ -1.81
MSH4YFL003C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
MSH4YFL003C ECM9Q02202 377 aa3.77□□□□□ -1.81
MSH4YFL003C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
MSH4YFL003C THI72Q08579 599 aa3.77□□□□□ -1.81
MSH4YFL003C RPD3P32561 433 aa3.77□□□□□ -1.81
MSH4YFL003C YHL012WP38709 493 aa3.77□□□□□ -1.81
MSH4YFL003C CKB2P38930 258 aa3.77□□□□□ -1.81
MSH4YFL003C ARP4P80428 489 aa3.77□□□□□ -1.81
MSH4YFL003C SNP1Q00916 300 aaPredicted RBP3.77□□□□□ -1.81
MSH4YFL003C NBA1Q08229 501 aaKnown RBP3.77□□□□□ -1.81
MSH4YFL003C RPS21AP0C0V8 87 aaKnown RBP3.76□□□□□ -1.81
MSH4YFL003C FUN30P31380 1131 aa3.76□□□□□ -1.81
MSH4YFL003C NIT1P40447 199 aa3.76□□□□□ -1.81
MSH4YFL003C SSL1Q04673 461 aaPredicted RBP3.76□□□□□ -1.81
MSH4YFL003C FAP7Q12055 197 aaPredicted RBP3.76□□□□□ -1.81
MSH4YFL003C AI1P03875 834 aa3.76□□□□□ -1.81
MSH4YFL003C SER1P33330 395 aaKnown RBP3.76□□□□□ -1.81
MSH4YFL003C SKN7P38889 622 aa3.76□□□□□ -1.81
MSH4YFL003C AKR1P39010 764 aa3.76□□□□□ -1.81
MSH4YFL003C CCT5P40413 562 aaKnown RBP3.76□□□□□ -1.81
MSH4YFL003C NIT2P47016 307 aa3.76□□□□□ -1.81
MSH4YFL003C SVL3Q03088 825 aaKnown RBP3.76□□□□□ -1.81
MSH4YFL003C Q0142Q9ZZW4 58 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms