RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W GYP8P43570 497 aa5.96□□□□□ -1.46
DEG1YFL001W COG6P53959 839 aa5.96□□□□□ -1.46
DEG1YFL001W ATP25Q03153 612 aa5.96□□□□□ -1.46
DEG1YFL001W YOR378WQ08902 515 aa5.96□□□□□ -1.46
DEG1YFL001W SLX4Q12098 748 aa5.96□□□□□ -1.46
DEG1YFL001W NHA1Q99271 985 aa5.96□□□□□ -1.46
DEG1YFL001W RAD18P10862 487 aa5.95□□□□□ -1.46
DEG1YFL001W CAF16P43569 289 aa5.95□□□□□ -1.46
DEG1YFL001W TY4A-JP47023 414 aa5.95□□□□□ -1.46
DEG1YFL001W YJL045WP47052 634 aa5.95□□□□□ -1.46
DEG1YFL001W DAM1P53267 343 aa5.95□□□□□ -1.46
DEG1YFL001W NCE103P53615 221 aa5.95□□□□□ -1.46
DEG1YFL001W VPS72Q03388 795 aa5.95□□□□□ -1.46
DEG1YFL001W MTQ2Q03920 221 aaPredicted RBP5.95□□□□□ -1.46
DEG1YFL001W COG8Q04632 607 aa5.95□□□□□ -1.46
DEG1YFL001W YLL058WQ12198 575 aa5.95□□□□□ -1.46
DEG1YFL001W THS1P04801 734 aaKnown RBP5.94□□□□□ -1.46
DEG1YFL001W ATP4P05626 244 aa5.94□□□□□ -1.46
DEG1YFL001W SFL1P20134 766 aa5.94□□□□□ -1.46
DEG1YFL001W STO1P34160 861 aaKnown RBP5.94□□□□□ -1.46
DEG1YFL001W EMC3P36039 253 aa5.94□□□□□ -1.46
DEG1YFL001W YKR078WP36158 585 aaKnown RBP5.94□□□□□ -1.46
DEG1YFL001W HOS3Q02959 697 aaKnown RBP5.94□□□□□ -1.46
DEG1YFL001W RSC3Q06639 885 aa5.94□□□□□ -1.46
DEG1YFL001W ENV7Q12003 364 aa5.94□□□□□ -1.46
DEG1YFL001W SNF5P18480 905 aa5.93□□□□□ -1.46
DEG1YFL001W PWP2P25635 923 aaKnown RBP5.93□□□□□ -1.46
DEG1YFL001W UGA2P38067 497 aa5.93□□□□□ -1.46
DEG1YFL001W TSL1P38427 1098 aaKnown RBP5.93□□□□□ -1.46
DEG1YFL001W GYP7P48365 746 aa5.93□□□□□ -1.46
DEG1YFL001W TNA1P53322 534 aa5.93□□□□□ -1.46
DEG1YFL001W SND1Q04007 877 aa5.93□□□□□ -1.46
DEG1YFL001W BUD21Q08492 214 aaPredicted RBP5.93□□□□□ -1.46
DEG1YFL001W TRE2Q08693 809 aa5.93□□□□□ -1.46
DEG1YFL001W YSC84P32793 468 aa5.92□□□□□ -1.46
DEG1YFL001W VPS24P36095 224 aaKnown RBP5.92□□□□□ -1.46
DEG1YFL001W GPT2P36148 743 aa5.92□□□□□ -1.46
DEG1YFL001W YBR238CP38330 731 aaKnown RBP5.92□□□□□ -1.46
DEG1YFL001W YFL054CP43549 646 aa5.92□□□□□ -1.46
DEG1YFL001W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
DEG1YFL001W YJR096WP47137 282 aa5.92□□□□□ -1.46
DEG1YFL001W PEX14P53112 341 aa5.92□□□□□ -1.46
DEG1YFL001W MET7Q08645 548 aa5.92□□□□□ -1.46
DEG1YFL001W MCD4P36051 919 aa5.91□□□□□ -1.46
DEG1YFL001W PCM1P38628 557 aaKnown RBP5.91□□□□□ -1.46
DEG1YFL001W NMD3P38861 518 aaKnown RBP5.91□□□□□ -1.46
DEG1YFL001W CKB2P38930 258 aa5.91□□□□□ -1.46
DEG1YFL001W ALT1P52893 592 aa5.91□□□□□ -1.46
DEG1YFL001W BUD9P53226 547 aa5.91□□□□□ -1.46
DEG1YFL001W TGL2P54857 326 aa5.91□□□□□ -1.46
DEG1YFL001W SNP1Q00916 300 aaPredicted RBP5.91□□□□□ -1.46
DEG1YFL001W MDM38Q08179 573 aa5.91□□□□□ -1.46
DEG1YFL001W PUS7Q08647 676 aaKnown RBP5.91□□□□□ -1.46
DEG1YFL001W PLC1P32383 869 aa5.9□□□□□ -1.47
DEG1YFL001W HOG1P32485 435 aa5.9□□□□□ -1.47
DEG1YFL001W PRP19P32523 503 aaKnown RBP5.9□□□□□ -1.47
DEG1YFL001W DAS1P47005 663 aa5.9□□□□□ -1.47
DEG1YFL001W NIT3P49954 291 aa5.9□□□□□ -1.47
DEG1YFL001W YKE2P52553 114 aa5.9□□□□□ -1.47
DEG1YFL001W MTC3P53077 123 aa5.9□□□□□ -1.47
DEG1YFL001W CEF1Q03654 590 aaPredicted RBP5.9□□□□□ -1.47
DEG1YFL001W TPP1Q03796 238 aa5.9□□□□□ -1.47
DEG1YFL001W GUD1Q07729 489 aa5.9□□□□□ -1.47
DEG1YFL001W TY1A-NL1Q12391 440 aaKnown RBP5.9□□□□□ -1.47
DEG1YFL001W BI4P03879 638 aa5.89□□□□□ -1.47
DEG1YFL001W KAR1P11927 433 aa5.89□□□□□ -1.47
DEG1YFL001W CDC48P25694 835 aaKnown RBP5.89□□□□□ -1.47
DEG1YFL001W RRM3P38766 723 aa5.89□□□□□ -1.47
DEG1YFL001W GIC1P38785 314 aa5.89□□□□□ -1.47
DEG1YFL001W NAB3P38996 802 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
DEG1YFL001W NPP2P39997 493 aa5.89□□□□□ -1.47
DEG1YFL001W PEA2P40091 420 aa5.89□□□□□ -1.47
DEG1YFL001W YER158CP40095 573 aa5.89□□□□□ -1.47
DEG1YFL001W DUG1P43616 481 aaKnown RBP5.89□□□□□ -1.47
DEG1YFL001W YDR514CQ04408 483 aa5.89□□□□□ -1.47
DEG1YFL001W ATG33Q06485 197 aa5.89□□□□□ -1.47
DEG1YFL001W YTM1Q12024 460 aaPredicted RBP5.89□□□□□ -1.47
DEG1YFL001W COQ4O13525 335 aa5.88□□□□□ -1.47
DEG1YFL001W HIR1P32479 840 aa5.88□□□□□ -1.47
DEG1YFL001W FUI1P38196 639 aa5.88□□□□□ -1.47
DEG1YFL001W PIK1P39104 1066 aa5.88□□□□□ -1.47
DEG1YFL001W SRT1Q03175 343 aa5.88□□□□□ -1.47
DEG1YFL001W VMS1Q04311 632 aaKnown RBP5.88□□□□□ -1.47
DEG1YFL001W REH1Q06709 432 aa5.88□□□□□ -1.47
DEG1YFL001W GIN4Q12263 1142 aa5.88□□□□□ -1.47
DEG1YFL001W MPH2P0CD99 609 aa5.87□□□□□ -1.47
DEG1YFL001W RPS4AP0CX35 261 aaKnown RBP5.87□□□□□ -1.47
DEG1YFL001W RPS4BP0CX36 261 aaKnown RBP5.87□□□□□ -1.47
DEG1YFL001W FUN30P31380 1131 aa5.87□□□□□ -1.47
DEG1YFL001W OAF1P39720 1047 aaPredicted RBP5.87□□□□□ -1.47
DEG1YFL001W GZF3P42944 551 aaKnown RBP5.87□□□□□ -1.47
DEG1YFL001W YNL034WP53963 612 aa5.87□□□□□ -1.47
DEG1YFL001W YNL018CP53976 612 aa5.87□□□□□ -1.47
DEG1YFL001W NYV1Q12255 253 aa5.87□□□□□ -1.47
DEG1YFL001W SST2P11972 698 aaKnown RBP5.86□□□□□ -1.47
DEG1YFL001W HMG1P12683 1054 aa5.86□□□□□ -1.47
DEG1YFL001W PER1P25625 357 aa5.86□□□□□ -1.47
DEG1YFL001W TFC4P33339 1025 aa5.86□□□□□ -1.47
DEG1YFL001W RRT14P40470 206 aa5.86□□□□□ -1.47
DEG1YFL001W AIM14P53109 570 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms