RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W CIK1Q01649 594 aa8.17□□□□□ -1.1
YRF1-1YDR545W YLR177WQ06251 628 aa8.17□□□□□ -1.1
YRF1-1YDR545W UGA2P38067 497 aa8.17□□□□□ -1.1
YRF1-1YDR545W TIM11P81449 96 aaPredicted RBP8.17□□□□□ -1.1
YRF1-1YDR545W YLH47Q06493 454 aa8.17□□□□□ -1.1
YRF1-1YDR545W MET7Q08645 548 aa8.17□□□□□ -1.1
YRF1-1YDR545W UBP14P38237 781 aaKnown RBP8.17□□□□□ -1.1
YRF1-1YDR545W CCC2P38995 1004 aa8.17□□□□□ -1.1
YRF1-1YDR545W CWC2Q12046 339 aaPredicted RBP8.17□□□□□ -1.1
YRF1-1YDR545W PPR1P07272 904 aaPredicted RBP8.17□□□□□ -1.1
YRF1-1YDR545W YGR016WP53209 190 aa8.17□□□□□ -1.1
YRF1-1YDR545W ORM2Q06144 216 aa8.17□□□□□ -1.1
YRF1-1YDR545W THR4P16120 514 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W SHM1P37292 490 aaPredicted RBP8.16□□□□□ -1.1
YRF1-1YDR545W ARB1P40024 610 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W NOG1Q02892 647 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W SUM1P46676 1062 aa8.16□□□□□ -1.1
YRF1-1YDR545W RBL2P48606 106 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W LSC2P53312 427 aa8.16□□□□□ -1.1
YRF1-1YDR545W HPC2Q01448 625 aa8.16□□□□□ -1.1
YRF1-1YDR545W MAG2Q06436 670 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W SEC18P18759 758 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W IME1P21190 360 aa8.16□□□□□ -1.1
YRF1-1YDR545W RPS5P26783 225 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W RIB7P33312 244 aa8.16□□□□□ -1.1
YRF1-1YDR545W MCD4P36051 919 aa8.16□□□□□ -1.1
YRF1-1YDR545W SIP5P40210 489 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W YRF1-1P0CX20 1796 aa8.16□□□□□ -1.1
YRF1-1YDR545W YRF1-5P0CX21 1796 aa8.16□□□□□ -1.1
YRF1-1YDR545W YRF1-8P0CX22 1796 aa8.16□□□□□ -1.1
YRF1-1YDR545W SBP1P10080 294 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W PRI1P10363 409 aa8.16□□□□□ -1.1
YRF1-1YDR545W GCD6P32501 712 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W CSM3Q04659 317 aa8.16□□□□□ -1.1
YRF1-1YDR545W PNP1Q05788 311 aa8.16□□□□□ -1.1
YRF1-1YDR545W SMD2Q06217 110 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W SSB1P11484 613 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W SSB2P40150 613 aaKnown RBP8.16□□□□□ -1.1
YRF1-1YDR545W PCL10P53124 433 aa8.16□□□□□ -1.1
YRF1-1YDR545W DCD1P06773 312 aa8.15□□□□□ -1.1
YRF1-1YDR545W RCR1P38212 213 aa8.15□□□□□ -1.1
YRF1-1YDR545W EPS1P40557 701 aa8.15□□□□□ -1.1
YRF1-1YDR545W BCP1Q06338 283 aa8.15□□□□□ -1.1
YRF1-1YDR545W PCF11P39081 626 aaPredicted RBP8.15□□□□□ -1.1
YRF1-1YDR545W RLP7P40693 322 aaKnown RBP8.15□□□□□ -1.1
YRF1-1YDR545W MCM3P24279 971 aaKnown RBP8.15□□□□□ -1.11
YRF1-1YDR545W NIP1P32497 812 aaKnown RBP8.15□□□□□ -1.11
YRF1-1YDR545W CCL1P37366 393 aa8.15□□□□□ -1.11
YRF1-1YDR545W TAF1P46677 1066 aa8.15□□□□□ -1.11
YRF1-1YDR545W PLP1Q04004 230 aa8.15□□□□□ -1.11
YRF1-1YDR545W YLR125WQ12138 136 aa8.15□□□□□ -1.11
YRF1-1YDR545W TCB1Q12466 1186 aa8.15□□□□□ -1.11
YRF1-1YDR545W SEM1O94742 89 aa8.15□□□□□ -1.11
YRF1-1YDR545W CIT1P00890 479 aa8.15□□□□□ -1.11
YRF1-1YDR545W PRP5P21372 849 aaPredicted RBP8.15□□□□□ -1.11
YRF1-1YDR545W APL2P36000 726 aaPredicted RBP8.15□□□□□ -1.11
YRF1-1YDR545W BOI1P38041 980 aaKnown RBP8.15□□□□□ -1.11
YRF1-1YDR545W ERP5P38819 212 aa8.15□□□□□ -1.11
YRF1-1YDR545W RNR4P49723 345 aaKnown RBP8.15□□□□□ -1.11
YRF1-1YDR545W HIF1Q12373 385 aa8.15□□□□□ -1.11
YRF1-1YDR545W BAS1P22035 811 aa8.14□□□□□ -1.11
YRF1-1YDR545W HIR1P32479 840 aa8.14□□□□□ -1.11
YRF1-1YDR545W RXT2P38255 430 aa8.14□□□□□ -1.11
YRF1-1YDR545W CDC6P09119 513 aa8.14□□□□□ -1.11
YRF1-1YDR545W DPB2P24482 689 aaPredicted RBP8.14□□□□□ -1.11
YRF1-1YDR545W GCG1P32656 232 aaKnown RBP8.14□□□□□ -1.11
YRF1-1YDR545W MRP8P35719 219 aa8.14□□□□□ -1.11
YRF1-1YDR545W ALG5P40350 334 aa8.14□□□□□ -1.11
YRF1-1YDR545W UBA2P52488 636 aa8.14□□□□□ -1.11
YRF1-1YDR545W ZIP2P53061 704 aa8.14□□□□□ -1.11
YRF1-1YDR545W MDM1Q01846 1127 aa8.14□□□□□ -1.11
YRF1-1YDR545W YKR005CQ02203 525 aa8.14□□□□□ -1.11
YRF1-1YDR545W USA1Q03714 838 aa8.14□□□□□ -1.11
YRF1-1YDR545W GIS4Q04233 774 aa8.14□□□□□ -1.11
YRF1-1YDR545W KIP1P28742 1111 aa8.14□□□□□ -1.11
YRF1-1YDR545W YKR015CP36111 568 aa8.14□□□□□ -1.11
YRF1-1YDR545W YPL216WQ08964 1102 aa8.14□□□□□ -1.11
YRF1-1YDR545W NFI1Q12216 726 aa8.14□□□□□ -1.11
YRF1-1YDR545W SEC2P17065 759 aa8.14□□□□□ -1.11
YRF1-1YDR545W TAF6P53040 516 aa8.14□□□□□ -1.11
YRF1-1YDR545W ENO2P00925 437 aaKnown RBP8.13□□□□□ -1.11
YRF1-1YDR545W GCN3P14741 305 aa8.13□□□□□ -1.11
YRF1-1YDR545W YJU2P28320 278 aaPredicted RBP8.13□□□□□ -1.11
YRF1-1YDR545W APL6P46682 809 aa8.13□□□□□ -1.11
YRF1-1YDR545W CCM1P48237 864 aaPredicted RBP8.13□□□□□ -1.11
YRF1-1YDR545W SLA2P33338 968 aa8.13□□□□□ -1.11
YRF1-1YDR545W YEL1P34225 687 aa8.13□□□□□ -1.11
YRF1-1YDR545W JEM1P40358 645 aa8.13□□□□□ -1.11
YRF1-1YDR545W YNL320WP42840 284 aa8.13□□□□□ -1.11
YRF1-1YDR545W COS5P47187 383 aa8.13□□□□□ -1.11
YRF1-1YDR545W RPT6Q01939 405 aaKnown RBP8.13□□□□□ -1.11
YRF1-1YDR545W ADR1P07248 1323 aa8.13□□□□□ -1.11
YRF1-1YDR545W TFC4P33339 1025 aa8.13□□□□□ -1.11
YRF1-1YDR545W AXL1P40851 1208 aa8.13□□□□□ -1.11
YRF1-1YDR545W RPA14P50106 137 aa8.13□□□□□ -1.11
YRF1-1YDR545W PRP45P28004 379 aaPredicted RBP8.13□□□□□ -1.11
YRF1-1YDR545W HSP78P33416 811 aa8.13□□□□□ -1.11
YRF1-1YDR545W FMP33P46998 180 aa8.13□□□□□ -1.11
YRF1-1YDR545W SHR3Q02774 210 aa8.13□□□□□ -1.11
YRF1-1YDR545W YLR271WQ06152 274 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms