RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	BRO1	P48582	844 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	NAF1	P53919	492 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	DIG1	Q03063	452 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	EST2	Q06163	884 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	TUM1	Q08686	304 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	TUP1	P16649	713 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	SEC18	P18759	758 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	ATO2	P32907	282 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	BOL3	P39724	118 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	TGL3	P40308	642 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	AIP1	P46680	615 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	NMD5	P46970	1048 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	URB2	P47108	1174 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	CUE3	P53137	624 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	RPT6	Q01939	405 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	VTI1	Q04338	217 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	MSC6	Q08818	692 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	GET3	Q12154	354 aa	Known RBP	4.61	□□□□□ -1.67
UPC2	YDR213W	OCA6	Q12454	224 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	PTC5	Q12511	572 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	YMR085W	P0CF18	432 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	PYC1	P11154	1178 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	PWP1	P21304	576 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	SWI4	P25302	1093 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	CDC48	P25694	835 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	SEC20	P28791	383 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	GPI10	P30777	616 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	XRS2	P33301	854 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	RER2	P35196	286 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	LHS1	P36016	881 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	SET4	P42948	560 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	TAD1	P53065	400 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	PRP43	P53131	767 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	STE20	Q03497	939 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	UTP14	Q04500	899 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	MPC54	Q08550	464 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	NFI1	Q12216	726 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	DBP10	Q12389	995 aa	Known RBP	4.6	□□□□□ -1.67
UPC2	YDR213W	CKI1	P20485	582 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	SPO11	P23179	398 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	KTR7	P40504	517 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	AXL1	P40851	1208 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	LEM3	P42838	414 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	YFL034W	P43564	1073 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	UBP16	Q02863	499 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	SPC24	Q04477	213 aa		4.6	□□□□□ -1.67
UPC2	YDR213W	HIS4	P00815	799 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	POL3	P15436	1097 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	TRM1	P15565	570 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	YHL050C	P38721	697 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	SET5	P38890	526 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	YHR219W	P38900	624 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	SMX2	P40204	77 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	XKS1	P42826	600 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	CPR6	P53691	371 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	MUB1	Q03162	620 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	ACM1	Q08981	209 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	YLL054C	Q12244	843 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	YEL077C	Q3E7X8	1277 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	FRT1	Q99332	602 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	CHO2	P05374	869 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	SLY41	P22215	453 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	RIB7	P33312	244 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	MAD1	P40957	749 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	IST1	P53843	298 aa	Predicted RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	ADE16	P54113	591 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	PRP42	Q03776	544 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	MTC5	Q03897	1148 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	GIS4	Q04233	774 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	AGE1	Q04412	482 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	POB3	Q04636	552 aa	Known RBP	4.59	□□□□□ -1.67
UPC2	YDR213W	YPR084W	Q06821	456 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	YAP7	Q08182	245 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	SIL1	Q08199	421 aa		4.59	□□□□□ -1.67
UPC2	YDR213W	PRP9	P19736	530 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	CDC10	P25342	322 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	ILV6	P25605	309 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	RAD16	P31244	790 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	PYC2	P32327	1180 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	EFB1	P32471	206 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	CBF2	P32504	956 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	MRE11	P32829	692 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	SPC42	P36094	363 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	ERG7	P38604	731 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	BEM4	P39011	633 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	YEL023C	P39992	682 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	SCS2	P40075	244 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	VID27	P40157	782 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	ARI1	P53111	347 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	SUB1	P54000	292 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	MSH6	Q03834	1242 aa		4.59	□□□□□ -1.68
UPC2	YDR213W	SLK19	Q08581	821 aa	Known RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	CLF1	Q12309	687 aa	Predicted RBP	4.59	□□□□□ -1.68
UPC2	YDR213W	PRT1	P06103	763 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	VMA2	P16140	517 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	TYR1	P20049	452 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	ADY2	P25613	283 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
UPC2	YDR213W	EXO84	P38261	753 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	TDA10	P42938	290 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms