RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C CAN1P04817 590 aa5.97□□□□□ -1.45
NUP42YDR192C MET6P05694 767 aaKnown RBP5.97□□□□□ -1.45
NUP42YDR192C SRO9P25567 434 aaKnown RBP5.97□□□□□ -1.45
NUP42YDR192C GPB2P39717 880 aa5.97□□□□□ -1.45
NUP42YDR192C GUS1P46655 708 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
NUP42YDR192C PRY1P47032 299 aa5.97□□□□□ -1.45
NUP42YDR192C UTP14Q04500 899 aaKnown RBP5.97□□□□□ -1.45
NUP42YDR192C NBA1Q08229 501 aaKnown RBP5.97□□□□□ -1.45
NUP42YDR192C SSM4P40318 1319 aa5.97□□□□□ -1.45
NUP42YDR192C COQ2P32378 372 aa5.96□□□□□ -1.46
NUP42YDR192C TIM23P32897 222 aa5.96□□□□□ -1.46
NUP42YDR192C SAF1P38352 637 aa5.96□□□□□ -1.46
NUP42YDR192C SIT1P39980 628 aa5.96□□□□□ -1.46
NUP42YDR192C TAF8Q03750 510 aa5.96□□□□□ -1.46
NUP42YDR192C YDR306CQ06640 478 aa5.96□□□□□ -1.46
NUP42YDR192C TRM3Q07527 1436 aa5.96□□□□□ -1.46
NUP42YDR192C CHC1P22137 1653 aaKnown RBP5.95□□□□□ -1.46
NUP42YDR192C PPH3P32345 308 aa5.95□□□□□ -1.46
NUP42YDR192C AAR2P32357 355 aaPredicted RBP5.95□□□□□ -1.46
NUP42YDR192C MDL2P33311 773 aa5.95□□□□□ -1.46
NUP42YDR192C MDJ1P35191 511 aa5.95□□□□□ -1.46
NUP42YDR192C BAP2P38084 609 aa5.95□□□□□ -1.46
NUP42YDR192C YHL012WP38709 493 aa5.95□□□□□ -1.46
NUP42YDR192C CCC2P38995 1004 aa5.95□□□□□ -1.46
NUP42YDR192C AKR1P39010 764 aa5.95□□□□□ -1.46
NUP42YDR192C PIK1P39104 1066 aa5.95□□□□□ -1.46
NUP42YDR192C ICP55P40051 511 aa5.95□□□□□ -1.46
NUP42YDR192C IQG1Q12280 1495 aa5.95□□□□□ -1.46
NUP42YDR192C BNR1P40450 1375 aa5.94□□□□□ -1.46
NUP42YDR192C ADE8P04161 214 aa5.94□□□□□ -1.46
NUP42YDR192C MSB1P21339 1137 aaKnown RBP5.94□□□□□ -1.46
NUP42YDR192C SKN7P38889 622 aa5.94□□□□□ -1.46
NUP42YDR192C DUS3Q06053 668 aaKnown RBP5.94□□□□□ -1.46
NUP42YDR192C UBX5Q06682 500 aa5.94□□□□□ -1.46
NUP42YDR192C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
NUP42YDR192C YLL058WQ12198 575 aa5.94□□□□□ -1.46
NUP42YDR192C PUS1Q12211 544 aaKnown RBP5.94□□□□□ -1.46
NUP42YDR192C YVC1Q12324 675 aa5.94□□□□□ -1.46
NUP42YDR192C CHS2P14180 963 aa5.93□□□□□ -1.46
NUP42YDR192C YCK2P23292 546 aaKnown RBP5.93□□□□□ -1.46
NUP42YDR192C THI4P32318 326 aa5.93□□□□□ -1.46
NUP42YDR192C HBS1P32769 611 aaKnown RBP5.93□□□□□ -1.46
NUP42YDR192C PGM1P33401 570 aaKnown RBP5.93□□□□□ -1.46
NUP42YDR192C RCM1P53972 490 aa5.93□□□□□ -1.46
NUP42YDR192C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
NUP42YDR192C RGA2Q06407 1009 aa5.93□□□□□ -1.46
NUP42YDR192C GDB1Q06625 1536 aa5.93□□□□□ -1.46
NUP42YDR192C SNF5P18480 905 aa5.92□□□□□ -1.46
NUP42YDR192C SLA2P33338 968 aa5.92□□□□□ -1.46
NUP42YDR192C UGA2P38067 497 aa5.92□□□□□ -1.46
NUP42YDR192C NMD3P38861 518 aaKnown RBP5.92□□□□□ -1.46
NUP42YDR192C SLN1P39928 1220 aaPredicted RBP5.92□□□□□ -1.46
NUP42YDR192C MXR1P40029 184 aa5.92□□□□□ -1.46
NUP42YDR192C MTC5Q03897 1148 aa5.92□□□□□ -1.46
NUP42YDR192C PRO1P32264 428 aa5.91□□□□□ -1.46
NUP42YDR192C CDC12P32468 407 aaKnown RBP5.91□□□□□ -1.46
NUP42YDR192C DOM34P33309 386 aa5.91□□□□□ -1.46
NUP42YDR192C WHI3P34761 661 aaKnown RBP5.91□□□□□ -1.46
NUP42YDR192C RRT14P40470 206 aa5.91□□□□□ -1.46
NUP42YDR192C EAR1Q03212 550 aa5.91□□□□□ -1.46
NUP42YDR192C RSB1Q08417 382 aa5.91□□□□□ -1.46
NUP42YDR192C HBN1Q96VH4 193 aa5.91□□□□□ -1.46
NUP42YDR192C TOM70P07213 617 aaKnown RBP5.9□□□□□ -1.46
NUP42YDR192C SAM35P14693 329 aa5.9□□□□□ -1.46
NUP42YDR192C DBP2P24783 546 aaKnown RBP5.9□□□□□ -1.46
NUP42YDR192C NAM7P30771 971 aaKnown RBP5.9□□□□□ -1.46
NUP42YDR192C SAH1P39954 449 aaKnown RBP5.9□□□□□ -1.46
NUP42YDR192C YPL034WQ03083 165 aa5.9□□□□□ -1.46
NUP42YDR192C LCD1Q04377 747 aa5.9□□□□□ -1.46
NUP42YDR192C ATG13Q06628 738 aa5.9□□□□□ -1.46
NUP42YDR192C KAE1P36132 386 aa5.89□□□□□ -1.47
NUP42YDR192C PET10P36139 283 aa5.89□□□□□ -1.47
NUP42YDR192C YKR078WP36158 585 aaKnown RBP5.89□□□□□ -1.47
NUP42YDR192C MNN1P39106 762 aa5.89□□□□□ -1.47
NUP42YDR192C UBP6P43593 499 aaKnown RBP5.89□□□□□ -1.47
NUP42YDR192C CCM1P48237 864 aaPredicted RBP5.89□□□□□ -1.47
NUP42YDR192C YGL081WP53156 320 aa5.89□□□□□ -1.47
NUP42YDR192C TRE1Q08919 783 aa5.89□□□□□ -1.47
NUP42YDR192C YSP2Q06681 1438 aa5.89□□□□□ -1.47
NUP42YDR192C ERR1P0CX10 437 aa5.88□□□□□ -1.47
NUP42YDR192C ERR2P0CX11 437 aa5.88□□□□□ -1.47
NUP42YDR192C MSH2P25847 964 aa5.88□□□□□ -1.47
NUP42YDR192C BET3P36149 193 aa5.88□□□□□ -1.47
NUP42YDR192C OYE3P41816 400 aaPredicted RBP5.88□□□□□ -1.47
NUP42YDR192C RTA1P53047 317 aa5.88□□□□□ -1.47
NUP42YDR192C ENV11P53246 860 aa5.88□□□□□ -1.47
NUP42YDR192C UGO1Q03327 502 aa5.88□□□□□ -1.47
NUP42YDR192C RSC58Q07979 502 aa5.88□□□□□ -1.47
NUP42YDR192C YGR161W-CQ3E744 92 aa5.88□□□□□ -1.47
NUP42YDR192C RPC82P32349 654 aa5.87□□□□□ -1.47
NUP42YDR192C YRO2P38079 344 aa5.87□□□□□ -1.47
NUP42YDR192C HSV2P50079 448 aaPredicted RBP5.87□□□□□ -1.47
NUP42YDR192C YLR122CQ12312 125 aa5.87□□□□□ -1.47
NUP42YDR192C TY3B-GQ99315 1547 aa5.87□□□□□ -1.47
NUP42YDR192C BI4P03879 638 aa5.86□□□□□ -1.47
NUP42YDR192C YBR284WP38150 797 aa5.86□□□□□ -1.47
NUP42YDR192C MAK10Q02197 733 aa5.86□□□□□ -1.47
NUP42YDR192C HRQ1Q05549 1077 aa5.86□□□□□ -1.47
NUP42YDR192C MDM38Q08179 573 aa5.86□□□□□ -1.47
NUP42YDR192C MSD1P15179 658 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms