RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	SAH1	P39954	449 aa	Known RBP	4.24	□□□□□ -1.73
ATG31	YDR022C	NCS6	P53088	359 aa		4.24	□□□□□ -1.73
ATG31	YDR022C	TIM44	Q01852	431 aa		4.24	□□□□□ -1.73
ATG31	YDR022C	SRP1	Q02821	542 aa	Known RBP	4.24	□□□□□ -1.73
ATG31	YDR022C	EEB1	Q02891	456 aa		4.24	□□□□□ -1.73
ATG31	YDR022C	HRQ1	Q05549	1077 aa		4.24	□□□□□ -1.73
ATG31	YDR022C	OMS1	Q06668	471 aa		4.24	□□□□□ -1.73
ATG31	YDR022C	CAD1	P24813	409 aa	Known RBP	4.23	□□□□□ -1.73
ATG31	YDR022C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
ATG31	YDR022C	SUL1	P38359	859 aa		4.23	□□□□□ -1.73
ATG31	YDR022C	GIC1	P38785	314 aa		4.23	□□□□□ -1.73
ATG31	YDR022C	MET10	P39692	1035 aa		4.23	□□□□□ -1.73
ATG31	YDR022C	RRP15	Q06511	250 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG31	YDR022C	YOL073C	Q08232	322 aa		4.23	□□□□□ -1.73
ATG31	YDR022C	MCH5	Q08777	521 aa		4.23	□□□□□ -1.73
ATG31	YDR022C	KAR4	P25583	335 aa		4.22	□□□□□ -1.73
ATG31	YDR022C	HEM3	P28789	327 aa		4.22	□□□□□ -1.73
ATG31	YDR022C	MNR2	P35724	969 aa		4.22	□□□□□ -1.73
ATG31	YDR022C	YLR040C	Q07988	224 aa		4.22	□□□□□ -1.73
ATG31	YDR022C	YKL151C	P36059	337 aa		4.21	□□□□□ -1.74
ATG31	YDR022C	YLR225C	Q05948	407 aa	Known RBP	4.2	□□□□□ -1.74
ATG31	YDR022C	ACF2	Q12168	779 aa		4.2	□□□□□ -1.74
ATG31	YDR022C	LAS17	Q12446	633 aa		4.2	□□□□□ -1.74
ATG31	YDR022C	ERG4	P25340	473 aa		4.19	□□□□□ -1.74
ATG31	YDR022C	SED4	P25365	1065 aa		4.19	□□□□□ -1.74
ATG31	YDR022C	QRI1	P43123	477 aa	Known RBP	4.19	□□□□□ -1.74
ATG31	YDR022C	BUL1	P48524	976 aa		4.19	□□□□□ -1.74
ATG31	YDR022C	RNT1	Q02555	471 aa		4.19	□□□□□ -1.74
ATG31	YDR022C	WHI4	Q07655	649 aa	Known RBP	4.19	□□□□□ -1.74
ATG31	YDR022C	TRP4	P07285	380 aa	Predicted RBP	4.18	□□□□□ -1.74
ATG31	YDR022C	ATF1	P40353	525 aa		4.18	□□□□□ -1.74
ATG31	YDR022C	RAI1	P53063	387 aa	Known RBP	4.18	□□□□□ -1.74
ATG31	YDR022C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
ATG31	YDR022C	OYE2	Q03558	400 aa	Known RBP	4.18	□□□□□ -1.74
ATG31	YDR022C	TMN2	Q04562	672 aa		4.18	□□□□□ -1.74
ATG31	YDR022C	YPR196W	Q06595	470 aa		4.18	□□□□□ -1.74
ATG31	YDR022C	UPC2	Q12151	913 aa		4.18	□□□□□ -1.74
ATG31	YDR022C	CDC12	P32468	407 aa	Known RBP	4.17	□□□□□ -1.74
ATG31	YDR022C	YKR078W	P36158	585 aa	Known RBP	4.16	□□□□□ -1.74
ATG31	YDR022C	YER158C	P40095	573 aa		4.16	□□□□□ -1.74
ATG31	YDR022C	SFB2	P53953	876 aa		4.16	□□□□□ -1.74
ATG31	YDR022C	IRC10	Q08118	586 aa		4.16	□□□□□ -1.74
ATG31	YDR022C	GYP7	P48365	746 aa		4.15	□□□□□ -1.75
ATG31	YDR022C	STB4	P50104	949 aa		4.15	□□□□□ -1.75
ATG31	YDR022C	DUS3	Q06053	668 aa	Known RBP	4.15	□□□□□ -1.75
ATG31	YDR022C	BDF2	Q07442	638 aa		4.15	□□□□□ -1.75
ATG31	YDR022C	PPR1	P07272	904 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG31	YDR022C	SBA1	P28707	216 aa	Known RBP	4.14	□□□□□ -1.75
ATG31	YDR022C	CUE2	P36075	443 aa	Known RBP	4.14	□□□□□ -1.75
ATG31	YDR022C	NPP2	P39997	493 aa		4.14	□□□□□ -1.75
ATG31	YDR022C	YGR053C	P53234	283 aa		4.14	□□□□□ -1.75
ATG31	YDR022C	VPS30	Q02948	557 aa		4.14	□□□□□ -1.75
ATG31	YDR022C	YMR206W	Q03695	313 aa		4.14	□□□□□ -1.75
ATG31	YDR022C	ABD1	P32783	436 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG31	YDR022C	YML020W	Q03722	664 aa		4.13	□□□□□ -1.75
ATG31	YDR022C	ESC2	Q06340	456 aa		4.13	□□□□□ -1.75
ATG31	YDR022C	ALG7	P07286	448 aa		4.12	□□□□□ -1.75
ATG31	YDR022C	AGP1	P25376	633 aa		4.12	□□□□□ -1.75
ATG31	YDR022C	CDC48	P25694	835 aa	Known RBP	4.12	□□□□□ -1.75
ATG31	YDR022C	PPH3	P32345	308 aa		4.12	□□□□□ -1.75
ATG31	YDR022C	GDE1	Q02979	1223 aa		4.12	□□□□□ -1.75
ATG31	YDR022C	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
ATG31	YDR022C	NOT3	P06102	836 aa	Known RBP	4.11	□□□□□ -1.75
ATG31	YDR022C	MET3	P08536	511 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	CLN2	P20438	545 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	NAP1	P25293	417 aa	Known RBP	4.11	□□□□□ -1.75
ATG31	YDR022C	STE14	P32584	239 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	DAS1	P47005	663 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	FAA4	P47912	694 aa	Known RBP	4.11	□□□□□ -1.75
ATG31	YDR022C	TPO2	P53283	614 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	LGE1	Q02796	332 aa	Known RBP	4.11	□□□□□ -1.75
ATG31	YDR022C	PEX19	Q07418	342 aa		4.11	□□□□□ -1.75
ATG31	YDR022C	FAL1	Q12099	399 aa	Known RBP	4.11	□□□□□ -1.75
ATG31	YDR022C	MTH1	P35198	433 aa		4.1	□□□□□ -1.75
ATG31	YDR022C	YBR238C	P38330	731 aa	Known RBP	4.1	□□□□□ -1.75
ATG31	YDR022C	TSL1	P38427	1098 aa	Known RBP	4.1	□□□□□ -1.75
ATG31	YDR022C	MBP1	P39678	833 aa		4.1	□□□□□ -1.75
ATG31	YDR022C	SNM1	P40993	198 aa		4.1	□□□□□ -1.75
ATG31	YDR022C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
ATG31	YDR022C	SCT1	P32784	759 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	STE13	P33894	931 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	SPC42	P36094	363 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	GND2	P53319	492 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	MUK1	Q02866	612 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	YDR306C	Q06640	478 aa		4.09	□□□□□ -1.75
ATG31	YDR022C	NOP8	Q08287	484 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG31	YDR022C	ADE8	P04161	214 aa		4.08	□□□□□ -1.76
ATG31	YDR022C	VPS16	Q03308	798 aa		4.08	□□□□□ -1.76
ATG31	YDR022C	DLT1	Q04216	342 aa		4.08	□□□□□ -1.76
ATG31	YDR022C	SWM1	Q12379	170 aa		4.08	□□□□□ -1.76
ATG31	YDR022C	TRM11	Q12463	433 aa		4.08	□□□□□ -1.76
ATG31	YDR022C	SEC21	P32074	935 aa	Known RBP	4.07	□□□□□ -1.76
ATG31	YDR022C	YHL017W	P38745	532 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	SDP1	P40479	209 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	SDS3	P40505	327 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	YKE2	P52553	114 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	CWC24	P53769	259 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	SHE9	Q04172	456 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	FRE5	Q08908	694 aa		4.07	□□□□□ -1.76
ATG31	YDR022C	RFA1	P22336	621 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms