RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C RKM1Q08961 583 aaPredicted RBP7.55□□□□□ -1.2
CDC13YDL220C OSM1P21375 501 aaKnown RBP7.55□□□□□ -1.2
CDC13YDL220C GDA1P32621 518 aa7.55□□□□□ -1.2
CDC13YDL220C SEC8P32855 1065 aa7.55□□□□□ -1.2
CDC13YDL220C UBC6P33296 250 aaPredicted RBP7.55□□□□□ -1.2
CDC13YDL220C FAR7P43592 221 aa7.55□□□□□ -1.2
CDC13YDL220C TMA22P47089 198 aaPredicted RBP7.55□□□□□ -1.2
CDC13YDL220C RMD1Q03441 430 aa7.55□□□□□ -1.2
CDC13YDL220C SPC24Q04477 213 aa7.55□□□□□ -1.2
CDC13YDL220C FAP7Q12055 197 aaPredicted RBP7.55□□□□□ -1.2
CDC13YDL220C ADE2P21264 571 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C URE2P23202 354 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C YBR287WP38355 427 aa7.54□□□□□ -1.2
CDC13YDL220C RTS1P38903 757 aa7.54□□□□□ -1.2
CDC13YDL220C FTR1P40088 404 aa7.54□□□□□ -1.2
CDC13YDL220C TFG2P41896 400 aaPredicted RBP7.54□□□□□ -1.2
CDC13YDL220C BRO1P48582 844 aa7.54□□□□□ -1.2
CDC13YDL220C ATG1P53104 897 aa7.54□□□□□ -1.2
CDC13YDL220C MRM2P53123 320 aa7.54□□□□□ -1.2
CDC13YDL220C MPS2P53159 387 aa7.54□□□□□ -1.2
CDC13YDL220C POB3Q04636 552 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C YOL057WQ08225 711 aa7.54□□□□□ -1.2
CDC13YDL220C RPN8Q08723 338 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C RRP6Q12149 733 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C DSF1P0CX08 502 aa7.54□□□□□ -1.2
CDC13YDL220C YNR073CP0CX09 502 aa7.54□□□□□ -1.2
CDC13YDL220C REC107P21651 314 aa7.54□□□□□ -1.2
CDC13YDL220C UBA1P22515 1024 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C KIP1P28742 1111 aa7.54□□□□□ -1.2
CDC13YDL220C PYC2P32327 1180 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C PTR2P32901 601 aa7.54□□□□□ -1.2
CDC13YDL220C PGM2P37012 569 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C UBA2P52488 636 aa7.54□□□□□ -1.2
CDC13YDL220C CPA2P03965 1118 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C AFG2P32794 780 aa7.54□□□□□ -1.2
CDC13YDL220C YNG2P38806 282 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C FKH1P40466 484 aa7.54□□□□□ -1.2
CDC13YDL220C PHB1P40961 287 aa7.54□□□□□ -1.2
CDC13YDL220C YFL066CP43538 392 aa7.54□□□□□ -1.2
CDC13YDL220C YGL176CP46945 554 aa7.54□□□□□ -1.2
CDC13YDL220C ATP22P50273 684 aaPredicted RBP7.54□□□□□ -1.2
CDC13YDL220C MMT1Q03218 510 aa7.54□□□□□ -1.2
CDC13YDL220C VPS36Q06696 566 aa7.54□□□□□ -1.2
CDC13YDL220C OPY2Q06810 360 aa7.54□□□□□ -1.2
CDC13YDL220C CDC53Q12018 815 aaKnown RBP7.54□□□□□ -1.2
CDC13YDL220C YLR125WQ12138 136 aa7.54□□□□□ -1.2
CDC13YDL220C ACF2Q12168 779 aa7.54□□□□□ -1.2
CDC13YDL220C RPO21P04050 1733 aaKnown RBP7.53□□□□□ -1.2
CDC13YDL220C TEC1P18412 486 aa7.53□□□□□ -1.2
CDC13YDL220C DPB2P24482 689 aaPredicted RBP7.53□□□□□ -1.2
CDC13YDL220C HXT3P32466 567 aaKnown RBP7.53□□□□□ -1.2
CDC13YDL220C YBR062CP38239 180 aa7.53□□□□□ -1.2
CDC13YDL220C IFA38P38286 347 aa7.53□□□□□ -1.2
CDC13YDL220C PIK1P39104 1066 aa7.53□□□□□ -1.2
CDC13YDL220C IRR1P40541 1150 aa7.53□□□□□ -1.2
CDC13YDL220C SSK22P25390 1331 aaPredicted RBP7.53□□□□□ -1.2
CDC13YDL220C BNR1P40450 1375 aa7.53□□□□□ -1.2
CDC13YDL220C PGK1P00560 416 aaKnown RBP7.53□□□□□ -1.2
CDC13YDL220C MAK16P10962 306 aaPredicted RBP7.53□□□□□ -1.2
CDC13YDL220C TSR4P25040 408 aa7.53□□□□□ -1.2
CDC13YDL220C BUD23P25627 275 aaPredicted RBP7.53□□□□□ -1.2
CDC13YDL220C TPS2P31688 896 aaKnown RBP7.53□□□□□ -1.2
CDC13YDL220C DYS1P38791 387 aa7.53□□□□□ -1.2
CDC13YDL220C FCY21P40039 528 aa7.53□□□□□ -1.2
CDC13YDL220C ESL1P40456 1118 aa7.53□□□□□ -1.2
CDC13YDL220C TAF3Q12297 353 aa7.53□□□□□ -1.2
CDC13YDL220C ARG4P04076 463 aaPredicted RBP7.52□□□□□ -1.21
CDC13YDL220C ILS1P09436 1072 aaKnown RBP7.52□□□□□ -1.21
CDC13YDL220C YAP1P19880 650 aaKnown RBP7.52□□□□□ -1.21
CDC13YDL220C MGM1P32266 881 aa7.52□□□□□ -1.21
CDC13YDL220C AIM9P40053 627 aaKnown RBP7.52□□□□□ -1.21
CDC13YDL220C APS3P47064 194 aa7.52□□□□□ -1.21
CDC13YDL220C VPS38Q05919 439 aa7.52□□□□□ -1.21
CDC13YDL220C SCM3Q12334 223 aa7.52□□□□□ -1.21
CDC13YDL220C SEM1O94742 89 aa7.52□□□□□ -1.21
CDC13YDL220C CKI1P20485 582 aa7.52□□□□□ -1.21
CDC13YDL220C YCR016WP25617 290 aaKnown RBP7.52□□□□□ -1.21
CDC13YDL220C SCT1P32784 759 aa7.52□□□□□ -1.21
CDC13YDL220C MNN2P38069 597 aa7.52□□□□□ -1.21
CDC13YDL220C HEK2P38199 381 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
CDC13YDL220C RGA1P39083 1007 aa7.52□□□□□ -1.21
CDC13YDL220C SAP185P40856 1058 aa7.52□□□□□ -1.21
CDC13YDL220C TMA64Q04600 565 aaKnown RBP7.52□□□□□ -1.21
CDC13YDL220C MPH3P0CE00 602 aa7.51□□□□□ -1.21
CDC13YDL220C VMA1P17255 1071 aaKnown RBP7.51□□□□□ -1.21
CDC13YDL220C RPB4P20433 221 aaPredicted RBP7.51□□□□□ -1.21
CDC13YDL220C CNA1P23287 553 aa7.51□□□□□ -1.21
CDC13YDL220C MVD1P32377 396 aaKnown RBP7.51□□□□□ -1.21
CDC13YDL220C NFU1P32860 256 aa7.51□□□□□ -1.21
CDC13YDL220C MET12P46151 657 aa7.51□□□□□ -1.21
CDC13YDL220C ECM11Q04110 302 aa7.51□□□□□ -1.21
CDC13YDL220C TAF9Q05027 157 aa7.51□□□□□ -1.21
CDC13YDL220C UIP4Q08926 304 aa7.51□□□□□ -1.21
CDC13YDL220C BUG1Q12191 341 aa7.51□□□□□ -1.21
CDC13YDL220C GCN3P14741 305 aa7.51□□□□□ -1.21
CDC13YDL220C TPM1P17536 199 aaKnown RBP7.51□□□□□ -1.21
CDC13YDL220C YJU2P28320 278 aaPredicted RBP7.51□□□□□ -1.21
CDC13YDL220C VPS21P36017 210 aaKnown RBP7.51□□□□□ -1.21
CDC13YDL220C PDS1P40316 373 aaPredicted RBP7.51□□□□□ -1.21
CDC13YDL220C YJR008WP47085 338 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms