RNA–Protein interactions for RNA: YDL155W

CLB3, Transcript of B-type cyclin involved in cell cycle progression, yeast

Gene CLB3, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLB3	YDL155W	MSC2	Q03455	724 aa		4.68	□□□□□ -1.66
CLB3	YDL155W	NSE3	Q05541	303 aa		4.68	□□□□□ -1.66
CLB3	YDL155W	ATG13	Q06628	738 aa		4.68	□□□□□ -1.66
CLB3	YDL155W	THO2	P53552	1597 aa	Known RBP	4.68	□□□□□ -1.66
CLB3	YDL155W	YTA7	P40340	1379 aa		4.67	□□□□□ -1.66
CLB3	YDL155W	RPL11A	P0C0W9	174 aa	Known RBP	4.67	□□□□□ -1.66
CLB3	YDL155W	DEF1	P35732	738 aa	Known RBP	4.67	□□□□□ -1.66
CLB3	YDL155W	IRR1	P40541	1150 aa		4.67	□□□□□ -1.66
CLB3	YDL155W	SPP382	Q06411	708 aa	Predicted RBP	4.67	□□□□□ -1.66
CLB3	YDL155W	FMP25	Q08023	583 aa		4.67	□□□□□ -1.66
CLB3	YDL155W	RPL11B	Q3E757	174 aa	Predicted RBP	4.67	□□□□□ -1.66
CLB3	YDL155W	SGS1	P35187	1447 aa		4.66	□□□□□ -1.66
CLB3	YDL155W	HIR3	P47171	1648 aa		4.66	□□□□□ -1.66
CLB3	YDL155W	TIM54	P47045	478 aa		4.66	□□□□□ -1.66
CLB3	YDL155W	HUL5	P53119	910 aa		4.66	□□□□□ -1.66
CLB3	YDL155W	BDF2	Q07442	638 aa		4.66	□□□□□ -1.66
CLB3	YDL155W	NOP12	Q08208	459 aa	Known RBP	4.66	□□□□□ -1.66
CLB3	YDL155W	ECM5	Q03214	1411 aa		4.65	□□□□□ -1.66
CLB3	YDL155W	MDS3	P53094	1487 aa		4.65	□□□□□ -1.66
CLB3	YDL155W	ACE2	P21192	770 aa		4.65	□□□□□ -1.67
CLB3	YDL155W	SRP40	P32583	406 aa	Predicted RBP	4.65	□□□□□ -1.67
CLB3	YDL155W	PBY1	P38254	753 aa		4.65	□□□□□ -1.67
CLB3	YDL155W	PLB1	P39105	664 aa		4.65	□□□□□ -1.67
CLB3	YDL155W	SNF7	P39929	240 aa	Known RBP	4.65	□□□□□ -1.67
CLB3	YDL155W	PFD1	P46988	109 aa		4.65	□□□□□ -1.67
CLB3	YDL155W	CDC53	Q12018	815 aa	Known RBP	4.65	□□□□□ -1.67
CLB3	YDL155W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
CLB3	YDL155W	RPL8B	P29453	256 aa	Known RBP	4.64	□□□□□ -1.67
CLB3	YDL155W	YHR020W	P38708	688 aa	Known RBP	4.64	□□□□□ -1.67
CLB3	YDL155W	MND2	P40577	368 aa		4.64	□□□□□ -1.67
CLB3	YDL155W	URN1	Q06525	465 aa	Known RBP	4.64	□□□□□ -1.67
CLB3	YDL155W	ACM1	Q08981	209 aa		4.64	□□□□□ -1.67
CLB3	YDL155W	BI4	P03879	638 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	YKL091C	P33324	310 aa	Known RBP	4.63	□□□□□ -1.67
CLB3	YDL155W	SLA2	P33338	968 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	UGA2	P38067	497 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	HFM1	P51979	1187 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	SPO75	Q07798	868 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	BUD4	P47136	1447 aa		4.63	□□□□□ -1.67
CLB3	YDL155W	YKL151C	P36059	337 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	GEM1	P39722	662 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	YML122C	Q03207	126 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	ADY3	Q07732	790 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	TPO1	Q07824	586 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	FLC1	Q08967	793 aa		4.62	□□□□□ -1.67
CLB3	YDL155W	PEP1	P32319	1579 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	ALR2	P43553	858 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
CLB3	YDL155W	YGR125W	P53273	1036 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	UTP8	P53276	713 aa	Known RBP	4.61	□□□□□ -1.67
CLB3	YDL155W	RPN4	Q03465	531 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	HRQ1	Q05549	1077 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	EAF1	Q06337	982 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	UBX5	Q06682	500 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	XYL2	Q07993	356 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	OSH2	Q12451	1283 aa		4.61	□□□□□ -1.67
CLB3	YDL155W	CIT1	P00890	479 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	PRP9	P19736	530 aa	Known RBP	4.6	□□□□□ -1.67
CLB3	YDL155W	HSP60	P19882	572 aa	Known RBP	4.6	□□□□□ -1.67
CLB3	YDL155W	ARE1	P25628	610 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	HBS1	P32769	611 aa	Known RBP	4.6	□□□□□ -1.67
CLB3	YDL155W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
CLB3	YDL155W	RSP5	P39940	809 aa	Known RBP	4.6	□□□□□ -1.67
CLB3	YDL155W	BUD6	P41697	788 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	ERP6	P53198	216 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	DUS3	Q06053	668 aa	Known RBP	4.6	□□□□□ -1.67
CLB3	YDL155W	YDR306C	Q06640	478 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	PPM2	Q08282	695 aa		4.6	□□□□□ -1.67
CLB3	YDL155W	CIT2	P08679	460 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	BRN1	P38170	754 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	RRT14	P40470	206 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	MET12	P46151	657 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	EXG2	P52911	562 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	MTC3	P53077	123 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	DOS2	P54858	310 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	YOR131C	Q12486	218 aa		4.59	□□□□□ -1.67
CLB3	YDL155W	REV3	P14284	1504 aa		4.58	□□□□□ -1.68
CLB3	YDL155W	CAN1	P04817	590 aa		4.58	□□□□□ -1.68
CLB3	YDL155W	CDC12	P32468	407 aa	Known RBP	4.58	□□□□□ -1.68
CLB3	YDL155W	SAH1	P39954	449 aa	Known RBP	4.58	□□□□□ -1.68
CLB3	YDL155W	TAF8	Q03750	510 aa		4.58	□□□□□ -1.68
CLB3	YDL155W	FPR4	Q06205	392 aa	Predicted RBP	4.58	□□□□□ -1.68
CLB3	YDL155W	HIS5	P07172	385 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	HRR25	P29295	494 aa	Known RBP	4.57	□□□□□ -1.68
CLB3	YDL155W	AAR2	P32357	355 aa	Predicted RBP	4.57	□□□□□ -1.68
CLB3	YDL155W	MOH1	P38191	138 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	POA1	P38218	177 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	CCC2	P38995	1004 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	ZRG8	P40021	1076 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	KCS1	Q12494	1050 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	HBN1	Q96VH4	193 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	ATG2	P53855	1592 aa		4.57	□□□□□ -1.68
CLB3	YDL155W	THS1	P04801	734 aa	Known RBP	4.56	□□□□□ -1.68
CLB3	YDL155W	PPH3	P32345	308 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	AFR1	P33304	620 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	OAR1	P35731	278 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	YBR284W	P38150	797 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	SIT1	P39980	628 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	NPP2	P39997	493 aa		4.56	□□□□□ -1.68
CLB3	YDL155W	CHA4	P43634	648 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms