RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W IES1P43579 692 aa2.56□□□□□ -2
NUP170YBL079W FMS1P50264 508 aa2.56□□□□□ -2
NUP170YBL079W VID22Q05934 901 aa2.56□□□□□ -2
NUP170YBL079W RRD2Q12461 358 aa2.56□□□□□ -2
NUP170YBL079W NAT1P12945 854 aaKnown RBP2.56□□□□□ -2
NUP170YBL079W SEC23P15303 768 aaKnown RBP2.56□□□□□ -2
NUP170YBL079W PSE1P32337 1089 aaKnown RBP2.56□□□□□ -2
NUP170YBL079W RPT3P33298 428 aaKnown RBP2.56□□□□□ -2
NUP170YBL079W YHR054CP38780 354 aa2.56□□□□□ -2
NUP170YBL079W CTM1P38818 585 aa2.56□□□□□ -2
NUP170YBL079W EAF5P39995 279 aa2.56□□□□□ -2
NUP170YBL079W FMP10P40098 244 aa2.56□□□□□ -2
NUP170YBL079W PIB2P53191 635 aa2.56□□□□□ -2
NUP170YBL079W MYO5Q04439 1219 aaKnown RBP2.56□□□□□ -2
NUP170YBL079W ADY4Q05955 493 aa2.56□□□□□ -2
NUP170YBL079W ATG11Q12527 1178 aa2.56□□□□□ -2
NUP170YBL079W GSY1P23337 708 aa2.55□□□□□ -2
NUP170YBL079W MBR1P23493 339 aa2.55□□□□□ -2
NUP170YBL079W SUV3P32580 737 aa2.55□□□□□ -2
NUP170YBL079W PEX14P53112 341 aa2.55□□□□□ -2
NUP170YBL079W YML053CQ04978 212 aa2.55□□□□□ -2
NUP170YBL079W DBP5P20449 482 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W BUD14P27637 709 aa2.55□□□□□ -2
NUP170YBL079W COT1P32798 439 aa2.55□□□□□ -2
NUP170YBL079W MYO3P36006 1272 aa2.55□□□□□ -2
NUP170YBL079W MMS4P38257 691 aa2.55□□□□□ -2
NUP170YBL079W BIM1P40013 344 aa2.55□□□□□ -2
NUP170YBL079W CWC21Q03375 135 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W DSE3Q08729 430 aa2.55□□□□□ -2
NUP170YBL079W SNF1P06782 633 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W VAS1P07806 1104 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W RNR2P09938 399 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W FRS2P15625 503 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W CBP3P21560 335 aa2.55□□□□□ -2
NUP170YBL079W DRE2P36152 348 aa2.55□□□□□ -2
NUP170YBL079W MRX3P38172 270 aa2.55□□□□□ -2
NUP170YBL079W RPN3P40016 523 aaKnown RBP2.55□□□□□ -2
NUP170YBL079W FIS1P40515 155 aa2.55□□□□□ -2
NUP170YBL079W OPT1P40897 799 aa2.55□□□□□ -2
NUP170YBL079W CIR1P42940 261 aa2.55□□□□□ -2
NUP170YBL079W NUT1P53114 1132 aa2.55□□□□□ -2
NUP170YBL079W MDM35O60200 86 aa2.54□□□□□ -2
NUP170YBL079W PHO8P11491 566 aa2.54□□□□□ -2
NUP170YBL079W STB5P38699 743 aa2.54□□□□□ -2
NUP170YBL079W FTR1P40088 404 aa2.54□□□□□ -2
NUP170YBL079W FYV8P46949 817 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W CCE1Q03702 353 aa2.54□□□□□ -2
NUP170YBL079W UTP4Q06679 776 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W MTF2P10849 440 aa2.54□□□□□ -2
NUP170YBL079W SMC1P32908 1225 aa2.54□□□□□ -2
NUP170YBL079W BTT1P40314 149 aaPredicted RBP2.54□□□□□ -2
NUP170YBL079W FET5P43561 622 aa2.54□□□□□ -2
NUP170YBL079W YLH47Q06493 454 aa2.54□□□□□ -2
NUP170YBL079W URK1P27515 501 aa2.54□□□□□ -2
NUP170YBL079W HSP78P33416 811 aa2.54□□□□□ -2
NUP170YBL079W TSA1P34760 196 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W NUP82P40368 713 aa2.54□□□□□ -2
NUP170YBL079W YFR018CP43599 363 aa2.54□□□□□ -2
NUP170YBL079W RET3P53600 189 aa2.54□□□□□ -2
NUP170YBL079W DSE4P53753 1117 aa2.54□□□□□ -2
NUP170YBL079W NCS2P53923 493 aaPredicted RBP2.54□□□□□ -2
NUP170YBL079W RSM10Q03201 203 aa2.54□□□□□ -2
NUP170YBL079W RPN7Q06103 429 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W CRD1Q07560 283 aa2.54□□□□□ -2
NUP170YBL079W YOL024WQ08172 172 aa2.54□□□□□ -2
NUP170YBL079W YOL036WQ08206 761 aa2.54□□□□□ -2
NUP170YBL079W RGR1P19263 1082 aa2.54□□□□□ -2
NUP170YBL079W CYS3P31373 394 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W CCL1P37366 393 aa2.54□□□□□ -2
NUP170YBL079W VAC8P39968 578 aa2.54□□□□□ -2
NUP170YBL079W NPP2P39997 493 aa2.54□□□□□ -2
NUP170YBL079W PUF6Q04373 656 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W RLP24Q07915 199 aaKnown RBP2.54□□□□□ -2
NUP170YBL079W SMC6Q12749 1114 aa2.54□□□□□ -2
NUP170YBL079W SEM1O94742 89 aa2.53□□□□□ -2
NUP170YBL079W TGL3P40308 642 aa2.53□□□□□ -2
NUP170YBL079W DSN1P40568 576 aa2.53□□□□□ -2
NUP170YBL079W ALG11P53954 548 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W MAS1P10507 462 aa2.53□□□□□ -2
NUP170YBL079W GPI10P30777 616 aa2.53□□□□□ -2
NUP170YBL079W SGE1P33335 543 aa2.53□□□□□ -2
NUP170YBL079W RER2P35196 286 aa2.53□□□□□ -2
NUP170YBL079W SUL1P38359 859 aa2.53□□□□□ -2
NUP170YBL079W RSM7P47150 247 aa2.53□□□□□ -2
NUP170YBL079W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
NUP170YBL079W CDC53Q12018 815 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W VPS5Q92331 675 aa2.53□□□□□ -2
NUP170YBL079W GAL80P04387 435 aa2.53□□□□□ -2
NUP170YBL079W SAM1P10659 382 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W COQ1P18900 473 aa2.53□□□□□ -2
NUP170YBL079W RPT1P33299 467 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W APM2P38700 605 aa2.53□□□□□ -2
NUP170YBL079W YJR079WP47126 109 aa2.53□□□□□ -2
NUP170YBL079W CUE3P53137 624 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W YNL108CP53929 270 aa2.53□□□□□ -2
NUP170YBL079W DUS3Q06053 668 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W GPI13Q07830 1017 aa2.53□□□□□ -2
NUP170YBL079W MEX67Q99257 599 aaKnown RBP2.53□□□□□ -2
NUP170YBL079W HIS5P07172 385 aa2.52□□□□□ -2.01
NUP170YBL079W CLN3P13365 580 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms