RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YPL277CQ08989 487 aa14.76□□□□□ -0.05
SSA1YAL005C DBP5P20449 482 aaKnown RBP14.76□□□□□ -0.05
SSA1YAL005C PSP2P50109 593 aaKnown RBP14.76□□□□□ -0.05
SSA1YAL005C PAH1P32567 862 aa14.75□□□□□ -0.05
SSA1YAL005C DAK1P54838 584 aaKnown RBP14.75□□□□□ -0.05
SSA1YAL005C EBS1Q03466 884 aaKnown RBP14.75□□□□□ -0.05
SSA1YAL005C RME1P32338 300 aaKnown RBP14.74□□□□□ -0.05
SSA1YAL005C TOS3P43637 560 aa14.74□□□□□ -0.05
SSA1YAL005C CDC37P06101 506 aaKnown RBP14.74□□□□□ -0.05
SSA1YAL005C OM45P16547 393 aa14.74□□□□□ -0.05
SSA1YAL005C MRC1P25588 1096 aa14.74□□□□□ -0.05
SSA1YAL005C GPT2P36148 743 aa14.74□□□□□ -0.05
SSA1YAL005C SAD1P43589 448 aa14.74□□□□□ -0.05
SSA1YAL005C VPS62P53285 467 aa14.74□□□□□ -0.05
SSA1YAL005C RLP24Q07915 199 aaKnown RBP14.74□□□□□ -0.05
SSA1YAL005C MDM20Q12387 796 aaKnown RBP14.74□□□□□ -0.05
SSA1YAL005C ATG11Q12527 1178 aa14.74□□□□□ -0.05
SSA1YAL005C PCK1P10963 549 aa14.73□□□□□ -0.05
SSA1YAL005C SWE1P32944 819 aa14.73□□□□□ -0.05
SSA1YAL005C YET1P35723 206 aa14.73□□□□□ -0.05
SSA1YAL005C EAF5P39995 279 aa14.73□□□□□ -0.05
SSA1YAL005C CAF130P53280 1122 aaPredicted RBP14.73□□□□□ -0.05
SSA1YAL005C MSC2Q03455 724 aa14.73□□□□□ -0.05
SSA1YAL005C EFT1P32324 842 aaKnown RBP14.72□□□□□ -0.05
SSA1YAL005C AIM21P40563 679 aa14.72□□□□□ -0.05
SSA1YAL005C MAM3Q12296 706 aa14.72□□□□□ -0.05
SSA1YAL005C VPS13Q07878 3144 aa14.72□□□□□ -0.05
SSA1YAL005C UBC1P21734 215 aaKnown RBP14.72□□□□□ -0.05
SSA1YAL005C YSC83P32792 385 aa14.72□□□□□ -0.05
SSA1YAL005C UBP5P39944 805 aa14.72□□□□□ -0.05
SSA1YAL005C CUR1Q06469 252 aa14.72□□□□□ -0.05
SSA1YAL005C COT1P32798 439 aa14.71□□□□□ -0.05
SSA1YAL005C SMY2P32909 740 aaKnown RBP14.71□□□□□ -0.05
SSA1YAL005C UBP13P38187 747 aa14.71□□□□□ -0.05
SSA1YAL005C YAP7Q08182 245 aa14.71□□□□□ -0.05
SSA1YAL005C SCP160P06105 1222 aaKnown RBP RIP-Chip data14.7□□□□□ -0.06not detected
SSA1YAL005C RPC53P25441 422 aa14.7□□□□□ -0.06
SSA1YAL005C NAM7P30771 971 aaKnown RBP14.7□□□□□ -0.06
SSA1YAL005C ACF4P47129 309 aa14.7□□□□□ -0.06
SSA1YAL005C TAM41P53230 385 aa14.7□□□□□ -0.06
SSA1YAL005C RTT102P53330 157 aa14.7□□□□□ -0.06
SSA1YAL005C RTP1Q12751 981 aa14.7□□□□□ -0.06
SSA1YAL005C MIC60P36112 540 aa14.7□□□□□ -0.06
SSA1YAL005C MRF1P30775 413 aaPredicted RBP14.69□□□□□ -0.06
SSA1YAL005C CCM1P48237 864 aaPredicted RBP14.69□□□□□ -0.06
SSA1YAL005C IES4Q08561 116 aa14.69□□□□□ -0.06
SSA1YAL005C MED1Q12321 566 aa14.69□□□□□ -0.06
SSA1YAL005C PHO8P11491 566 aa14.68□□□□□ -0.06
SSA1YAL005C KTR2P33550 425 aa14.68□□□□□ -0.06
SSA1YAL005C RPC25P35718 212 aa14.68□□□□□ -0.06
SSA1YAL005C DEF1P35732 738 aaKnown RBP14.68□□□□□ -0.06
SSA1YAL005C VID30P53076 958 aa14.68□□□□□ -0.06
SSA1YAL005C MOT1P32333 1867 aa14.68□□□□□ -0.06
SSA1YAL005C MAK16P10962 306 aaPredicted RBP14.68□□□□□ -0.06
SSA1YAL005C SNA3P14359 133 aa14.68□□□□□ -0.06
SSA1YAL005C MPE1P35728 441 aaKnown RBP14.68□□□□□ -0.06
SSA1YAL005C SHM1P37292 490 aaPredicted RBP14.68□□□□□ -0.06
SSA1YAL005C TFG2P41896 400 aaPredicted RBP14.68□□□□□ -0.06
SSA1YAL005C YML020WQ03722 664 aa14.68□□□□□ -0.06
SSA1YAL005C YPR148CQ06523 435 aa14.68□□□□□ -0.06
SSA1YAL005C MCM2P29469 868 aa14.67□□□□□ -0.06
SSA1YAL005C UIP5P36137 443 aa14.67□□□□□ -0.06
SSA1YAL005C YNL146WP53906 100 aa14.67□□□□□ -0.06
SSA1YAL005C PAM1P37304 830 aaKnown RBP14.66□□□□□ -0.06
SSA1YAL005C GUA1P38625 525 aaKnown RBP14.66□□□□□ -0.06
SSA1YAL005C MGA2P40578 1113 aa14.66□□□□□ -0.06
SSA1YAL005C LCB2P40970 561 aa14.66□□□□□ -0.06
SSA1YAL005C VPS72Q03388 795 aa14.66□□□□□ -0.06
SSA1YAL005C LDH1P38139 375 aa14.66□□□□□ -0.06
SSA1YAL005C SPT8P38915 602 aa14.66□□□□□ -0.06
SSA1YAL005C COG4Q06096 861 aa14.66□□□□□ -0.06
SSA1YAL005C RPS6AP0CX37 236 aaKnown RBP14.65□□□□□ -0.06
SSA1YAL005C RPS6BP0CX38 236 aaPredicted RBP14.65□□□□□ -0.06
SSA1YAL005C SSD1P24276 1250 aaKnown RBP RIP-Chip data14.65□□□□□ -0.06not detected
SSA1YAL005C MIP6P38760 659 aaKnown RBP14.65□□□□□ -0.06
SSA1YAL005C TPO2P53283 614 aa14.65□□□□□ -0.06
SSA1YAL005C MSH3P25336 1018 aa14.64□□□□□ -0.07
SSA1YAL005C CTM1P38818 585 aa14.64□□□□□ -0.07
SSA1YAL005C ENV11P53246 860 aa14.64□□□□□ -0.07
SSA1YAL005C VTC3Q02725 835 aa14.64□□□□□ -0.07
SSA1YAL005C SPO75Q07798 868 aa14.64□□□□□ -0.07
SSA1YAL005C CDC53Q12018 815 aaKnown RBP14.64□□□□□ -0.07
SSA1YAL005C VPS35P34110 944 aa14.64□□□□□ -0.07
SSA1YAL005C FAL1Q12099 399 aaKnown RBP14.64□□□□□ -0.07
SSA1YAL005C AFT1P22149 690 aa14.63□□□□□ -0.07
SSA1YAL005C SEC65P29478 273 aa14.63□□□□□ -0.07
SSA1YAL005C DUR3P33413 735 aa14.63□□□□□ -0.07
SSA1YAL005C YDR090CQ03193 310 aa14.63□□□□□ -0.07
SSA1YAL005C OSW2Q12202 724 aa14.63□□□□□ -0.07
SSA1YAL005C HIF1Q12373 385 aa14.63□□□□□ -0.07
SSA1YAL005C TMT1P32643 299 aa14.62□□□□□ -0.07
SSA1YAL005C SAP190P36123 1033 aa14.62□□□□□ -0.07
SSA1YAL005C CWC2Q12046 339 aaPredicted RBP14.62□□□□□ -0.07
SSA1YAL005C MSS51P32335 436 aa14.62□□□□□ -0.07
SSA1YAL005C AZR1P50080 613 aa14.62□□□□□ -0.07
SSA1YAL005C CUS1Q02554 436 aaPredicted RBP14.62□□□□□ -0.07
SSA1YAL005C PXL1P36166 706 aa14.61□□□□□ -0.07
SSA1YAL005C INP51P40559 946 aaKnown RBP14.61□□□□□ -0.07
SSA1YAL005C ORC5P50874 479 aa14.61□□□□□ -0.07
SSA1YAL005C MLH2Q07980 695 aa14.61□□□□□ -0.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms