RNA–Protein interactions for RNA: ENST00000641648.1

SAMMSON-220, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,207 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-220ENST00000641648 CCDC102BQ68D86 513 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 ZNF280DQ6N043 979 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 DMRTB1Q96MA1 342 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 RPS6KC1Q96S38 1066 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 QTRT2Q9H974 415 aaKnown RBP8.8□□□□□ -1
SAMMSON-220ENST00000641648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
SAMMSON-220ENST00000641648 SWAP70Q9UH65 585 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
SAMMSON-220ENST00000641648 GTF2IP78347 998 aa8.79□□□□□ -1
SAMMSON-220ENST00000641648 VPS37DQ86XT2 251 aa8.79□□□□□ -1
SAMMSON-220ENST00000641648 DDX56Q9NY93 547 aaKnown RBP8.79□□□□□ -1
SAMMSON-220ENST00000641648 GPSM3Q9Y4H4 160 aa8.79□□□□□ -1
SAMMSON-220ENST00000641648 CCDC189A1A4V9 331 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 IGHA2P01877 340 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 EVA1CP58658 441 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 RACK1P63244 317 aaKnown RBP8.78□□□□□ -1
SAMMSON-220ENST00000641648 ATP2B2Q01814 1243 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 FUT2Q10981 343 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 CASC1Q6TDU7 716 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 NBPF11Q86T75 865 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 SPC25Q9HBM1 224 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 CYLDQ9NQC7 956 aa8.78□□□□□ -1
SAMMSON-220ENST00000641648 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 COPB2P35606 906 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 SERINC3Q13530 473 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 NBPF6Q5VWK0 638 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 TPCN2Q8NHX9 752 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 STAG1Q8WVM7 1258 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 NBPF4Q96M43 638 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 NRBP1Q9UHY1 535 aa8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 G3BP2Q9UN86 482 aaKnown RBP8.77□□□□□ -1.01
SAMMSON-220ENST00000641648 ZRANB2O95218 330 aaKnown RBP eCLIP8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 F12P00748 615 aaPredicted RBP8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 S100BP04271 92 aaPredicted RBP8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 ZNF394Q53GI3 561 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 PLEKHG4Q58EX7 1191 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 MKL1Q969V6 931 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 ALKBH8Q96BT7 664 aaKnown RBP8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 CRELD1Q96HD1 420 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 PRKAB1Q9Y478 270 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 PCDHB9Q9Y5E1 797 aa8.76□□□□□ -1.01
SAMMSON-220ENST00000641648 MPSTP25325 297 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 GGCXP38435 758 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 NBPF1Q3BBV0 1214 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 PCGF5Q86SE9 256 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 PURBQ96QR8 312 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 TSPAN18Q96SJ8 248 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 FAM129BQ96TA1 746 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 HINFPQ9BQA5 517 aa8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-220ENST00000641648 CCDC180Q9P1Z9 1646 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 ACTN4O43707 911 aaKnown RBP8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 ZPR1O75312 459 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 GJA8P48165 433 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 SRA1Q9HD15 236 aaKnown RBP8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 DOLKQ9UPQ8 538 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 NUB1Q9Y5A7 615 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 PCDHGB7Q9Y5F8 929 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 RPGRIP1LQ68CZ1 1315 aa8.74□□□□□ -1.01
SAMMSON-220ENST00000641648 M0R2N6 131 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 GPR182O15218 404 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 PRC1O43663 620 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 NRDCO43847 1150 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 LGR5O75473 907 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 GNA15P30679 374 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 ATP6V1AP38606 617 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 PTK2Q05397 1052 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 LAPTM4AQ15012 233 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 ZKSCAN2Q63HK3 967 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 USP48Q86UV5 1035 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 FMNL3Q8IVF7 1028 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 CKAP2LQ8IYA6 745 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 RNPC3Q96LT9 517 aaKnown RBP8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 SETDB2Q96T68 719 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 OCSTAMPQ9BR26 566 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 TPX2Q9ULW0 747 aaKnown RBP8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
SAMMSON-220ENST00000641648 CTSHP09668 335 aa8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 COPS2P61201 443 aa8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 NAA30Q147X3 362 aaPredicted RBP8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 ENOX2Q16206 610 aaKnown RBP8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 ALG1LQ6GMV1 187 aa8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 GET4Q7L5D6 327 aaPredicted RBP8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 TMX4Q9H1E5 349 aaPredicted RBP8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 TYW1Q9NV66 732 aaKnown RBP8.72□□□□□ -1.01
SAMMSON-220ENST00000641648 MAP3K20Q9NYL2 800 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms