RNA–Protein interactions for RNA: ENST00000641648.1

SAMMSON-220, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,207 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-220ENST00000641648 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
SAMMSON-220ENST00000641648 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
SAMMSON-220ENST00000641648 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
SAMMSON-220ENST00000641648 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
SAMMSON-220ENST00000641648 FOXD1Q16676 465 aa17.78■□□□□ 0.44
SAMMSON-220ENST00000641648 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
SAMMSON-220ENST00000641648 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
SAMMSON-220ENST00000641648 MSH5O43196 834 aa16.67■□□□□ 0.26
SAMMSON-220ENST00000641648 ADRA2BP18089 450 aa16.67■□□□□ 0.26
SAMMSON-220ENST00000641648 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
SAMMSON-220ENST00000641648 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
SAMMSON-220ENST00000641648 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SAMMSON-220ENST00000641648 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
SAMMSON-220ENST00000641648 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
SAMMSON-220ENST00000641648 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
SAMMSON-220ENST00000641648 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
SAMMSON-220ENST00000641648 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
SAMMSON-220ENST00000641648 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
SAMMSON-220ENST00000641648 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
SAMMSON-220ENST00000641648 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
SAMMSON-220ENST00000641648 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
SAMMSON-220ENST00000641648 KCNA4P22459 653 aa14.62□□□□□ -0.07
SAMMSON-220ENST00000641648 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
SAMMSON-220ENST00000641648 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
SAMMSON-220ENST00000641648 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
SAMMSON-220ENST00000641648 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
SAMMSON-220ENST00000641648 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
SAMMSON-220ENST00000641648 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
SAMMSON-220ENST00000641648 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
SAMMSON-220ENST00000641648 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
SAMMSON-220ENST00000641648 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
SAMMSON-220ENST00000641648 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
SAMMSON-220ENST00000641648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
SAMMSON-220ENST00000641648 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
SAMMSON-220ENST00000641648 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
SAMMSON-220ENST00000641648 ZBTB22O15209 634 aa13.52□□□□□ -0.25
SAMMSON-220ENST00000641648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
SAMMSON-220ENST00000641648 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
SAMMSON-220ENST00000641648 APLP2Q06481 763 aa13.47□□□□□ -0.25
SAMMSON-220ENST00000641648 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
SAMMSON-220ENST00000641648 CAPN15O75808 1086 aa13.41□□□□□ -0.26
SAMMSON-220ENST00000641648 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
SAMMSON-220ENST00000641648 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
SAMMSON-220ENST00000641648 DSG3P32926 999 aa13.34□□□□□ -0.27
SAMMSON-220ENST00000641648 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-220ENST00000641648 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
SAMMSON-220ENST00000641648 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
SAMMSON-220ENST00000641648 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
SAMMSON-220ENST00000641648 ABCB7O75027 752 aa13.06□□□□□ -0.32
SAMMSON-220ENST00000641648 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-220ENST00000641648 FKBP8Q14318 412 aa12.95□□□□□ -0.34
SAMMSON-220ENST00000641648 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
SAMMSON-220ENST00000641648 POLA2Q14181 598 aa12.94□□□□□ -0.34
SAMMSON-220ENST00000641648 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
SAMMSON-220ENST00000641648 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
SAMMSON-220ENST00000641648 BCANQ96GW7 911 aa12.9□□□□□ -0.34
SAMMSON-220ENST00000641648 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
SAMMSON-220ENST00000641648 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
SAMMSON-220ENST00000641648 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
SAMMSON-220ENST00000641648 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
SAMMSON-220ENST00000641648 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
SAMMSON-220ENST00000641648 ARXQ96QS3 562 aa12.58□□□□□ -0.4
SAMMSON-220ENST00000641648 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
SAMMSON-220ENST00000641648 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
SAMMSON-220ENST00000641648 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
SAMMSON-220ENST00000641648 FBLN2P98095 1184 aa12.5□□□□□ -0.41
SAMMSON-220ENST00000641648 POTEHQ6S545 545 aa12.5□□□□□ -0.41
SAMMSON-220ENST00000641648 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
SAMMSON-220ENST00000641648 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
SAMMSON-220ENST00000641648 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
SAMMSON-220ENST00000641648 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
SAMMSON-220ENST00000641648 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
SAMMSON-220ENST00000641648 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
SAMMSON-220ENST00000641648 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
SAMMSON-220ENST00000641648 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
SAMMSON-220ENST00000641648 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
SAMMSON-220ENST00000641648 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
SAMMSON-220ENST00000641648 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
SAMMSON-220ENST00000641648 MYT1Q01538 1121 aa12.27□□□□□ -0.45
SAMMSON-220ENST00000641648 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
SAMMSON-220ENST00000641648 GTF3C3Q9Y5Q9 886 aa12.23□□□□□ -0.45
SAMMSON-220ENST00000641648 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
SAMMSON-220ENST00000641648 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
SAMMSON-220ENST00000641648 HOMEZQ8IX15 550 aa12.21□□□□□ -0.45
SAMMSON-220ENST00000641648 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-220ENST00000641648 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
SAMMSON-220ENST00000641648 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
SAMMSON-220ENST00000641648 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
SAMMSON-220ENST00000641648 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
SAMMSON-220ENST00000641648 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
SAMMSON-220ENST00000641648 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
SAMMSON-220ENST00000641648 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
SAMMSON-220ENST00000641648 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
SAMMSON-220ENST00000641648 PKD2Q13563 968 aa12.02□□□□□ -0.49
SAMMSON-220ENST00000641648 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
SAMMSON-220ENST00000641648 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
SAMMSON-220ENST00000641648 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
SAMMSON-220ENST00000641648 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
SAMMSON-220ENST00000641648 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
SAMMSON-220ENST00000641648 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms