RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
SMPD3-206ENST00000566009 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
SMPD3-206ENST00000566009 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
SMPD3-206ENST00000566009 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
SMPD3-206ENST00000566009 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
SMPD3-206ENST00000566009 TRIOBPQ9H2D6 2365 aa12.9□□□□□ -0.34
SMPD3-206ENST00000566009 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
SMPD3-206ENST00000566009 SCNN1DP51172 638 aa12.9□□□□□ -0.34
SMPD3-206ENST00000566009 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
SMPD3-206ENST00000566009 STYK1Q6J9G0 422 aa12.9□□□□□ -0.34
SMPD3-206ENST00000566009 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
SMPD3-206ENST00000566009 GLIS2Q9BZE0 524 aaPredicted RBP12.9□□□□□ -0.34
SMPD3-206ENST00000566009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMPD3-206ENST00000566009 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
SMPD3-206ENST00000566009 HUNKP57058 714 aa12.89□□□□□ -0.35
SMPD3-206ENST00000566009 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
SMPD3-206ENST00000566009 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
SMPD3-206ENST00000566009 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
SMPD3-206ENST00000566009 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
SMPD3-206ENST00000566009 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
SMPD3-206ENST00000566009 COL6A3P12111 3177 aa12.88□□□□□ -0.35
SMPD3-206ENST00000566009 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
SMPD3-206ENST00000566009 SRGNP10124 158 aa12.87□□□□□ -0.35
SMPD3-206ENST00000566009 RGMBQ6NW40 437 aa12.87□□□□□ -0.35
SMPD3-206ENST00000566009 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
SMPD3-206ENST00000566009 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
SMPD3-206ENST00000566009 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 MPNDQ8N594 471 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 ZNF296Q8WUU4 475 aaPredicted RBP12.86□□□□□ -0.35
SMPD3-206ENST00000566009 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
SMPD3-206ENST00000566009 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
SMPD3-206ENST00000566009 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
SMPD3-206ENST00000566009 H0YGN5 161 aa12.84□□□□□ -0.35
SMPD3-206ENST00000566009 CABP4P57796 275 aa12.84□□□□□ -0.35
SMPD3-206ENST00000566009 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
SMPD3-206ENST00000566009 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
SMPD3-206ENST00000566009 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
SMPD3-206ENST00000566009 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
SMPD3-206ENST00000566009 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
SMPD3-206ENST00000566009 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
SMPD3-206ENST00000566009 COL15A1P39059 1388 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 EN2P19622 333 aaPredicted RBP12.82□□□□□ -0.36
SMPD3-206ENST00000566009 ZNF157P51786 506 aaPredicted RBP12.82□□□□□ -0.36
SMPD3-206ENST00000566009 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
SMPD3-206ENST00000566009 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
SMPD3-206ENST00000566009 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
SMPD3-206ENST00000566009 TJP1Q07157 1748 aa12.81□□□□□ -0.36
SMPD3-206ENST00000566009 FLT4P35916 1363 aa12.81□□□□□ -0.36
SMPD3-206ENST00000566009 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
SMPD3-206ENST00000566009 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
SMPD3-206ENST00000566009 GPRC5DQ9NZD1 345 aa12.8□□□□□ -0.36
SMPD3-206ENST00000566009 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
SMPD3-206ENST00000566009 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
SMPD3-206ENST00000566009 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SMPD3-206ENST00000566009 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
SMPD3-206ENST00000566009 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
SMPD3-206ENST00000566009 SLC10A3P09131 477 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 C2orf69Q8N8R5 385 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 EYA1Q99502 592 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
SMPD3-206ENST00000566009 BCORQ6W2J9 1755 aa12.78□□□□□ -0.36
SMPD3-206ENST00000566009 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
SMPD3-206ENST00000566009 GPR25O00155 361 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 NPHP1O15259 732 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 HIRAP54198 1017 aaPredicted RBP12.77□□□□□ -0.37
SMPD3-206ENST00000566009 CNBD1Q8NA66 436 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 COL4A5P29400 1685 aa12.77□□□□□ -0.37
SMPD3-206ENST00000566009 NPR1P16066 1061 aa12.76□□□□□ -0.37
SMPD3-206ENST00000566009 ST5P78524 1137 aa12.76□□□□□ -0.37
SMPD3-206ENST00000566009 PSMD1Q99460 953 aa12.76□□□□□ -0.37
SMPD3-206ENST00000566009 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
SMPD3-206ENST00000566009 KIAA0100Q14667 2235 aaKnown RBP12.75□□□□□ -0.37
SMPD3-206ENST00000566009 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
SMPD3-206ENST00000566009 FYB1O15117 783 aa12.74□□□□□ -0.37
SMPD3-206ENST00000566009 COL9A1P20849 921 aa12.74□□□□□ -0.37
SMPD3-206ENST00000566009 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
SMPD3-206ENST00000566009 FKTNO75072 461 aa12.73□□□□□ -0.37
SMPD3-206ENST00000566009 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
SMPD3-206ENST00000566009 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
SMPD3-206ENST00000566009 RBBP6Q7Z6E9 1792 aaKnown RBP12.73□□□□□ -0.37
SMPD3-206ENST00000566009 CEP290O15078 2479 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
SMPD3-206ENST00000566009 MTHFSP49914 203 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
SMPD3-206ENST00000566009 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms