RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
PAX3-210ENST00000555548 ALDH16A1Q8IZ83 802 aa10.05□□□□□ -0.8
PAX3-210ENST00000555548 ZDHHC1Q8WTX9 485 aa10.05□□□□□ -0.8
PAX3-210ENST00000555548 IFT43Q96FT9 208 aa10.05□□□□□ -0.8
PAX3-210ENST00000555548 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
PAX3-210ENST00000555548 CTSHP09668 335 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 NOS2P35228 1153 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
PAX3-210ENST00000555548 CNKSR1Q969H4 720 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 LNPKQ9C0E8 428 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 TLL2Q9Y6L7 1015 aa10.04□□□□□ -0.8
PAX3-210ENST00000555548 PCSK2P16519 638 aa10.03□□□□□ -0.8
PAX3-210ENST00000555548 TNNI2P48788 182 aa10.03□□□□□ -0.8
PAX3-210ENST00000555548 SH3PXD2AQ5TCZ1 1133 aa10.03□□□□□ -0.8
PAX3-210ENST00000555548 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
PAX3-210ENST00000555548 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
PAX3-210ENST00000555548 EIF1AYO14602 144 aaKnown RBP10.02□□□□□ -0.81
PAX3-210ENST00000555548 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.81
PAX3-210ENST00000555548 SIAH2O43255 324 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 NEFLP07196 543 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
PAX3-210ENST00000555548 DNAJC25Q9H1X3 360 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 KLK14Q9P0G3 267 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 HCN4Q9Y3Q4 1203 aa10.02□□□□□ -0.81
PAX3-210ENST00000555548 NCLP19338 710 aaKnown RBP10.01□□□□□ -0.81
PAX3-210ENST00000555548 GTF2F1P35269 517 aaKnown RBP eCLIP10.01□□□□□ -0.81
PAX3-210ENST00000555548 ORC1Q13415 861 aa10.01□□□□□ -0.81
PAX3-210ENST00000555548 ZNF654Q8IZM8 581 aa10.01□□□□□ -0.81
PAX3-210ENST00000555548 L3MBTL2Q969R5 705 aa10.01□□□□□ -0.81
PAX3-210ENST00000555548 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
PAX3-210ENST00000555548 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
PAX3-210ENST00000555548 NR3C2P08235 984 aa10□□□□□ -0.81
PAX3-210ENST00000555548 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
PAX3-210ENST00000555548 CLN3Q13286 438 aa10□□□□□ -0.81
PAX3-210ENST00000555548 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
PAX3-210ENST00000555548 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
PAX3-210ENST00000555548 PHACTR1Q9C0D0 580 aa10□□□□□ -0.81
PAX3-210ENST00000555548 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
PAX3-210ENST00000555548 ADH1AP07327 375 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
PAX3-210ENST00000555548 ARID5AQ03989 594 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 C1orf53Q5VUE5 145 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 GPR152Q8TDT2 470 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
PAX3-210ENST00000555548 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 INPP5FQ9Y2H2 1132 aa9.99□□□□□ -0.81
PAX3-210ENST00000555548 RPLP1P05386 114 aaKnown RBP9.98□□□□□ -0.81
PAX3-210ENST00000555548 DNAJA1P31689 397 aaKnown RBP9.98□□□□□ -0.81
PAX3-210ENST00000555548 GGCXP38435 758 aa9.98□□□□□ -0.81
PAX3-210ENST00000555548 RBL2Q08999 1139 aa9.98□□□□□ -0.81
PAX3-210ENST00000555548 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
PAX3-210ENST00000555548 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
PAX3-210ENST00000555548 GGNBP2Q9H3C7 697 aa9.98□□□□□ -0.81
PAX3-210ENST00000555548 OPLAHO14841 1288 aa9.97□□□□□ -0.81
PAX3-210ENST00000555548 RACK1P63244 317 aaKnown RBP9.97□□□□□ -0.81
PAX3-210ENST00000555548 CENPCQ03188 943 aa9.97□□□□□ -0.81
PAX3-210ENST00000555548 CCDC144BQ3MJ40 725 aa9.97□□□□□ -0.81
PAX3-210ENST00000555548 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
PAX3-210ENST00000555548 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
PAX3-210ENST00000555548 SRA1Q9HD15 236 aaKnown RBP9.97□□□□□ -0.81
PAX3-210ENST00000555548 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
PAX3-210ENST00000555548 GIPC1O14908 333 aa9.96□□□□□ -0.82
PAX3-210ENST00000555548 CPNE3O75131 537 aaKnown RBP9.96□□□□□ -0.82
PAX3-210ENST00000555548 USP48Q86UV5 1035 aa9.96□□□□□ -0.82
PAX3-210ENST00000555548 TTC16Q8NEE8 873 aa9.96□□□□□ -0.82
PAX3-210ENST00000555548 TMA7Q9Y2S6 64 aaKnown RBP9.96□□□□□ -0.82
PAX3-210ENST00000555548 PARP3Q9Y6F1 533 aa9.96□□□□□ -0.82
PAX3-210ENST00000555548 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
PAX3-210ENST00000555548 KCNC4Q03721 635 aa9.95□□□□□ -0.82
PAX3-210ENST00000555548 C8orf34Q49A92 452 aa9.95□□□□□ -0.82
PAX3-210ENST00000555548 HS2ST1Q7LGA3 356 aa9.95□□□□□ -0.82
PAX3-210ENST00000555548 HIRIP3Q9BW71 556 aaPredicted RBP9.95□□□□□ -0.82
PAX3-210ENST00000555548 NIFKQ9BYG3 293 aaKnown RBP9.95□□□□□ -0.82
PAX3-210ENST00000555548 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
PAX3-210ENST00000555548 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
PAX3-210ENST00000555548 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.94□□□□□ -0.82
PAX3-210ENST00000555548 SOGA3Q5TF21 947 aa9.94□□□□□ -0.82
PAX3-210ENST00000555548 C12orf49Q9H741 205 aa9.94□□□□□ -0.82
PAX3-210ENST00000555548 BCS1LQ9Y276 419 aa9.94□□□□□ -0.82
PAX3-210ENST00000555548 PTGIRP43119 386 aa9.93□□□□□ -0.82
PAX3-210ENST00000555548 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
PAX3-210ENST00000555548 ANKRD13AQ8IZ07 590 aa9.93□□□□□ -0.82
PAX3-210ENST00000555548 TLDC2A0PJX2 215 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 A6NHS1 94 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 MICAL2O94851 1124 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
PAX3-210ENST00000555548 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 NLRP3Q96P20 1036 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
PAX3-210ENST00000555548 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 GGT7Q9UJ14 662 aa9.92□□□□□ -0.82
PAX3-210ENST00000555548 WNT7AO00755 349 aa9.91□□□□□ -0.82
PAX3-210ENST00000555548 MCF2L2Q86YR7 1114 aa9.91□□□□□ -0.82
PAX3-210ENST00000555548 CCDC74AQ96AQ1 378 aa9.91□□□□□ -0.82
PAX3-210ENST00000555548 MEN1O00255 615 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 TXLNAP40222 546 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 GJA8P48165 433 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 ST13P50502 369 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms